Spiribacter roseus: BBH56_04235
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Entry
BBH56_04235 CDS
T06143
Name
(GenBank) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sros
Spiribacter roseus
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sros03016
]
BBH56_04235
Enzymes [BR:
sros01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BBH56_04235
Transfer RNA biogenesis [BR:
sros03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBH56_04235
Prokaryotic type
BBH56_04235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AUB78380
LinkDB
All DBs
Position
complement(852133..853191)
Genome browser
AA seq
352 aa
AA seq
DB search
MPVSGTGDWPLAWGTPVGTARVAVSPEDFQVDERLGFAPTGDGPHLLVRIRKRGLTTQQA
VQQLAGHWQVERRAMGYAGRKDRQAVTTQWLSVPWPVNAPLAPLGRVVDQDGQALDVIDV
QRHRRKLPVGALTGNRFTLTLRDVDAAPRDIAARLVTIARHGVPNYFGGQRFGRHGQNLD
RALNWLAGGERPRSRNDRSMLISAARSAMFNAVLARRIDAGDWSQPRPGDLLVLDGRGSL
FAAEAAETAFNRRRAAGLRIHPTGPLPGATNRRQPQTAALIERESAVLQDWAAVIQALAD
QRVTADRRALRLSVAALAGWRMAPGTWRLRFELTRGAYATMVIRELVEAVND
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ctgcccgtgagcgggacaggcgactggccgctcgcctggggcacgccggtgggcacggcg
cgtgttgcggtcagccccgaggatttccaagtcgacgagcgcctgggctttgccccgacc
ggggacggcccgcatctgctggtgcgtatccgcaaacgcggactgaccacccagcaggcc
gtccagcagctggccgggcactggcaggtggagcgccgggccatgggctatgccgggcgc
aaggaccgtcaggcggtcacgacgcaatggttatccgtgccctggccggtcaatgcgcca
ctcgccccgctgggtcgcgtggttgatcaggacgggcaggcgctggatgtgatcgatgtc
cagcgccaccggcgcaagctgccggtgggggcgctgacgggcaaccgcttcacccttacg
ctgcgtgatgtcgatgccgcgccccgggatatcgccgcgcggctcgtgaccattgcccgc
cacggggtgcccaattattttggtggccagcgttttggccgtcatggacagaatctggac
cgggcccttaattggctcgcgggcggcgagcgcccgcgctcgcgcaatgaccgcagcatg
ctgatctcggcggcacgctcggccatgttcaatgcggtgctggcgcggcgcattgacgcc
ggtgactggtcccagccgcgccccggcgatctgctggtgctcgatggacgtggcagcctc
tttgctgccgaggcggccgaaacggccttcaaccgccgccgcgcggccggcctgcggatc
caccccacggggcctctgcccggcgccaccaatcggcgccagccgcagacggcggcattg
atcgagcgcgagtcggcggtattgcaggactgggcggcggtcattcaggcgctggcggac
cagcgtgtcaccgccgatcgacgggcgctgcgtctgagcgtcgctgcgctcgctggctgg
cggatggcgccggggacctggcgcctgcgctttgagctgacccggggcgcctacgccacg
atggtgatccgcgagctggtcgaggcggtcaatgactga
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