Spiribacter roseus: BBH56_05755
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Entry
BBH56_05755 CDS
T06143
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sros
Spiribacter roseus
Pathway
sros03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BBH56_05755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sros03400
]
BBH56_05755
DNA repair and recombination proteins [BR:
sros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BBH56_05755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AUB78648
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Position
1176442..1179048
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AA seq
868 aa
AA seq
DB search
MNQSPRHTPMMQQFLRIKAEHPDILLFYRMGDFYELFYEDARRASELLDITLTQRGESAG
EPIPMAGVPVHSYEGYLARLLARGESVAICEQIGDPALAKGPVERQVVRVVTPGTVTDEA
LLEDRRSNLLTAIARDGDDWGLASLELAAGRYTVSEGHGEAGLSAELERLAPREVLIAES
AEPPVVPDQPAGVTRRPPWHFEREASERLLTRHFGTRDLSGFGVDSMPLAIAAAGALLQY
VSDTQRSALPHIRELRVEPTDAAITIDAASRRNLELETNLGGGSDHTLAAVLDTTVTAMG
SRTLRRWINRPLRDQAALRARQSAIAALIHHDPTELRETLRRCADVERISARIGMGSARP
RDLTGLRDTLAELPELAAVLDCHDEPRLMTLARDAAPQAGPADALDRALVTQPPVVIRDG
GVIADGYDAMLDELRDLSRNADDYLADLETRERDATGLSSLKVSFNRVHGYYIEISRSQS
DQAPSRYTRRQTLKSTERYITPELKGFEDKVLSARERALAREKALYESLVQWLGSHLAAL
MDLAAALAELDTLATLAERADSLGYVQPRLGETPGIRLRGGRHPVVERSTGQPFIPNDID
LDDQRRMLVITGPNMGGKSTYMRQVALITLMAHIGSFVPATEAAFGPIDRIFTRIGASDD
LAGGRSTFMVEMTETANILRNATRESLVLLDEIGRGTSTFDGLALAWATAEALCERIRAF
SLFATHYFEMTTLPEHSPGAANVHLEAVEHGERIVFLHSVREGPANQSYGLQVAALAGVP
DAVLQTARDKLTRLEASEPAVPQLSLFGETSGPPVPPPDPDPPASAVRARLEALNPDDLT
PRQAHDLLYELREQIEANESAPTQPRRP
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtcaccccgccacacccccatgatgcagcagttcctccggatcaaggcggaa
cacccggatatcctcctgttctaccgcatgggcgacttctacgagcttttctatgaggac
gcccgtcgcgcctcggaactgcttgacatcaccctgacccagcgcggtgaatcggccggt
gagccgattcccatggccggcgtcccggtccacagctacgaggggtatctcgcccggcta
ctcgcccggggcgagtctgtagcgatctgcgaacagattggtgacccggcgctcgccaaa
ggacccgtcgagcgtcaggtagtgcgcgtggtgacgcccggcacggtcaccgacgaggcg
ctgctggaagaccggcgcagcaacctgctgacggccatcgcccgcgatggcgacgactgg
ggcctggcaagcctggaactggcagcgggtcgatatacggtcagcgagggccacggcgag
gccggactgagcgcggaactcgaacggctcgcgccccgcgaggtcctgattgccgagtcc
gccgagccgccggtggtgcccgatcagccggccggggtcacccggcgcccgccctggcat
ttcgagcgcgaggccagtgaacgcctgctgacccgccattttggcacgcgcgacctgagc
ggctttggcgtggattcaatgcccctggcgatcgccgcggccggggcgcttctccagtac
gtgtccgacacccagcgctcggcactgccgcatatccgcgaactgcgcgtcgaacccacc
gatgcggccatcaccattgatgcggccagtcgccgcaacctcgagcttgaaaccaatctg
ggtggcggcagcgatcacaccctggcggctgtgcttgataccaccgtcaccgccatgggc
agtcgcaccctgcggcgctggatcaatcgcccactgcgcgaccaggcggcgctgcgggcc
cggcaatcggccatcgccgcgctcatccaccacgaccccaccgagctgcgcgagacgctg
cggcggtgcgccgatgttgagcggatcagtgcgcggatcggcatgggatccgcccggccg
cgggatctgaccggcctgcgcgacacgcttgccgagctgcccgagctggccgcggtgctc
gattgccacgacgagccacgcctgatgacgctggcccgcgatgccgccccgcaagcgggt
cccgccgacgccctggatcgcgcccttgtcacccagccgccggtcgtgatccgggacggc
ggcgtgatcgccgatggctatgacgcgatgctcgatgaactgcgcgacctgtcgcgcaac
gccgatgactacctcgccgacctcgagacccgcgagcgtgatgccaccggcctgagttcg
ctgaaggtcagtttcaaccgggtccatggctactacatcgagatcagtcgcagccagagc
gatcaggcgcccagccgatatacccggcgccagaccctcaagagcaccgagcgctacatc
acccctgagctcaagggcttcgaagacaaggtgctctcggcacgtgagcgggcgctggcg
cgggagaaggcgctctatgaatcactggttcagtggctgggctcgcacctggcggcgctc
atggacctggcggcggcgctggcggaactcgacaccctggccacgctggccgaacgcgcc
gacagcctcggctatgtccagccccggcttggtgagacccccgggatccgcctgcggggc
ggccgccatccggtcgtggagcgcagcaccgggcaacccttcatccccaacgacatcgac
ctggatgatcaacgacggatgctggtgattaccgggcccaacatgggcggcaaatccacc
tacatgcgccaggtcgcgctgatcaccctgatggcgcatatcggcagcttcgtgccggcg
accgaggccgcattcgggcccatcgaccggatcttcacccgcatcggcgcctcggacgat
ctggccggcggccgctcgacgtttatggtcgaaatgaccgagaccgccaacattctgcgc
aatgccacccgtgagagcctggtcctgctcgatgagatcggccgtggcaccagcaccttc
gacggtctggccctggcctgggcgactgccgaagcgctctgcgagcggatccgggccttc
agcctgttcgccacccattatttcgagatgaccaccctgcccgaacactcgcccggcgcg
gcgaatgtgcatctcgaggcggtggaacacggtgagcggatcgtgtttctgcacagcgtg
cgggaagggccggccaatcaaagctacggcctgcaggtggcggcgctcgccggcgtgccc
gatgcggtcctgcagacggcccgggacaagctgacacggctcgaggccagtgaaccggcg
gtcccgcagctctcgctgttcggtgaaacatccgggccgccggttccgcccccggatccc
gacccgccggcgagcgccgtgcgggcccggctcgaggcgctgaaccccgacgacctgaca
ccgcgccaggcccacgatctgctctacgagctgcgcgaacagattgaggcgaacgaatcc
gcccccacccaaccccggcgcccgtag
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