Spiribacter roseus: BBH56_05890
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Entry
BBH56_05890 CDS
T06143
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
sros
Spiribacter roseus
Pathway
sros00190
Oxidative phosphorylation
sros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
BBH56_05890
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBH56_05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sros03019
]
BBH56_05890
Enzymes [BR:
sros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
BBH56_05890
Messenger RNA biogenesis [BR:
sros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BBH56_05890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AUB78672
LinkDB
All DBs
Position
1209133..1211211
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AA seq
692 aa
AA seq
DB search
MQSDNLHHPGLYLNRQLSLLAFNERVLAQAADDSNPLLERLKFLCIASSNLDEFFEIRVA
GLRQARELGVGQSGPDNRTPQQVLREISERAHALVDEQYRLLNDEVTPALAAADIRFLRR
NEWTQAQQDWIRSYFETELLPILSPLGLDPAHPFPQVLNKSLNFIISLEGKDAFGRSSGM
AVVQAPRALPRIIQLPPELDGGGTYDFVFLSSVIHAHVTDLFPGMKTTGCYQFRVTRNSD
LYVDEEEVDDLLRAMEGELPSRRYGDAVRLEVAANCPEHMAHFLLEEFELEPEALYQVNG
PVNLNRLFAVCDLVDRPDLKYPAFKPGLPAELSHTGDIFKVMRRRDILLHHPFESFAPVI
ELLRQSAQDPDVLAIKQTLYRTGPDSAVVDHLVTAARSGKEVTVVVELRARFDEAANIGL
ANRLQEAGAHVVYGVVGHKTHAKLMLIVRRESGRLRHYVHLGTGNYHSRTARLYTDYGLM
TTRPAIGEDVHRVFLQLTSLGKVSALSHLLESPFTLHPGILEKIAREQRHAEAGRPARII
IKVNSLVEPKVIRALYAASQAGVGIDLIVRGMCCLRPGVEGVSDTIRVRSVIGRFLEHTR
VFYFANNGDPELYCSSADWMERNFFRRVEAAFPLLDAELRDRVLADLQTYLADNTQAWVL
DADGEYRRLTPGADETGVSAQTALLQGYGEDG
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcggacaacctccaccaccccgggctctacctgaaccgtcagttgagcctcctg
gccttcaatgagcgggtcctcgcgcaggcggccgacgactccaatccgctgctcgagcgg
ctcaagttcctctgcatcgcaagctcgaacctggacgaattcttcgagatccgggtggcg
ggtctgcgccaggcccgggaacttggcgtgggccagagcgggccggacaaccggacgccc
cagcaggtgctgcgcgagatcagcgaacgcgcccatgccctcgtggacgagcagtaccgg
ctgctcaatgatgaggtcaccccggcgctggccgcggcggatatccgctttctgcgccgc
aacgaatggacgcaggcgcagcaggactggatccgcagctatttcgagaccgagctcctg
cccatcctcagcccgctggggctggatccggcgcatccgttcccgcaggtcctcaataaa
agcctcaacttcatcatctcgctggaaggcaaggacgccttcgggcgcagcagcggcatg
gcggtggtccaggcgccacgggccctgccccgcatcatccagctgccaccggagctcgat
ggcggcggtacctacgacttcgtgttcctgtcctcggtcatccacgcccatgtcaccgac
ctgttcccgggcatgaagaccaccggctgctatcagttccgggtgacgcgcaactcggac
ctgtatgtcgacgaggaggaagtggatgacctgctccgggccatggagggcgagctgcca
tcacggcgctatggcgatgccgtgcgcctcgaggtggccgccaactgccccgagcacatg
gcgcatttcctgctcgaggagttcgaactcgagcccgaggccctctatcaggtcaacgga
ccggtcaatctcaaccggctgttcgcggtctgtgacctggtcgaccggcccgacctcaag
tacccggccttcaagcccgggttgccggcggaactcagccacaccggcgatattttcaag
gtcatgcggcggcgcgacatcctgctgcatcaccccttcgagtcgttcgccccggtcatc
gagctgctgcgccagtcagcccaggatcccgacgtgctggcgatcaagcagaccctgtac
cggaccggccccgactcggcggtggtcgatcatctggtcaccgccgcgcgcagcggcaaa
gaggtgaccgtggtggtggagttgcgcgcccgatttgacgaggcggccaacatcgggctt
gccaaccggctgcaggaggccggtgcgcatgtggtctatggggtggtgggtcacaagacc
cacgccaaactgatgctgatcgtacgccgggaaagcggtcggctgcgccattacgtccac
cttgggaccggcaactaccactcacgcacggcccggctctacaccgactatggcctgatg
acgacccgcccggccattggcgaggacgtccatcgcgtgttcctccagctcaccagcctc
ggcaaggtctcggcgctcagtcatctgctcgagtcaccgttcaccctgcatcccggcatt
ctcgagaagatcgcccgcgagcagcgccacgccgaggccggccgaccggcccggatcatc
atcaaggtcaactcgctggtcgaacccaaggtcatccgggcgctgtacgcggcatcccag
gcgggtgtcgggatcgacctgatcgtgcgtggcatgtgctgcctgcgtcccggcgtcgag
ggggtcagtgacaccatccgggtgcgctcggtcatcgggcggttcctcgagcacacgcgg
gtgttctacttcgccaacaacggcgacccggagctctactgcagctcggcggactggatg
gagcgcaacttcttccggcgcgtcgaggcggccttcccgctcctcgatgccgagctccgc
gaccgggtgctcgccgatctgcagacctatcttgcggataacacgcaggcctgggtgctg
gatgccgatggtgagtaccgccgcctcacccccggggccgatgagaccggcgtgagcgcc
cagaccgcgctgctccagggctacggcgaggacggctga
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