Spiribacter roseus: BBH56_06250
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Entry
BBH56_06250 CDS
T06143
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sros
Spiribacter roseus
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sros01011
]
BBH56_06250
Enzymes [BR:
sros01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BBH56_06250
Peptidoglycan biosynthesis and degradation proteins [BR:
sros01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BBH56_06250
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
AUB78739
LinkDB
All DBs
Position
complement(1286432..1287874)
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AA seq
480 aa
AA seq
DB search
MLTLRRILQTGLLLAAAGPAAAAPPASLPVPAALEPAIAFWERIYTDVGVGEGVIHDTDG
QMRIIARIDVPRPPQWQARRDAIEAALARHRKALNAAGSPALAERLRFQGGLRERFREGL
VRSGRWRSHIRTALAERGVPAALAALPHVESSFNPRARSHAGAAGLWQFTAGTGRRFLRI
DPLIDERLDPWRSTTAAAALLAHNYAEIGHWPLAITAYNHGLNGMRRAVRAVGSTHYMEI
REHYEGARFGFSSKNFYPALIAAARVDRDARRYFPDLEREAPAPVMRVELPHYTPVDTLL
TELAIDRGTLQRLNPALGPSVWDGRKFIPRGYGLVLPRADQGDWSAAVARLPGDRLYQDQ
RPSQVHRVQAGQTLSGIAMRYDVDVPTLMAANGLADPRRLRAGQRLDLPLAGSDPRSVGR
RQYEVRPGDTLGAIAVRHDVGTDQLMRLNELDHPDRIQAGQQLIVSRAASVAVVDMADEP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgttaacccttcgacgtatcctgcaaaccggcctgctgctggcggctgcgggcccggcg
gccgctgcacccccggccagcctgcccgtaccggcggcgctggagccggccattgccttc
tgggagcgcatctacaccgacgtaggggtgggtgagggcgtgatccacgacaccgacggg
cagatgcggatcatcgcccgtatcgatgtgccgcgaccgccccaatggcaggcccgccgc
gacgcgattgaggcggcgttggcgcggcatcgcaaggcattgaacgccgcaggttcgccg
gcgctggccgaacggctgcgttttcagggcgggctgcgcgagcgtttccgcgaggggctg
gtgcgctccgggcgctggcggtcgcatattcgcaccgcactggctgaacgcggtgtgccc
gcggcactggcggcactcccccacgtcgagtcgtcgttcaatccccgggcccgttcgcac
gccggtgccgctggcctgtggcagttcacggccggcaccgggcgccggttcctgcgtatc
gatccgttgatcgacgagcggcttgacccgtggcggagcaccactgcggcggccgcgctc
ctggcccacaattacgccgagatcggccactggccactggccatcaccgcctacaaccac
ggccttaatggcatgcgtcgtgcggtccgcgctgtcggctcgacgcactacatggagatc
cgcgagcactacgagggggcgcgtttcgggttttcatcgaagaatttctatccggccctg
atcgccgctgcccgggtggaccgggatgcccgcaggtactttcctgatctggagcgcgag
gcaccagccccggtcatgcgcgtcgagctgccgcactacacaccggtcgataccctgctg
acggagctggccatcgaccggggcacgctgcagcgcctcaaccccgccctcggtccgtcg
gtctgggacggccgcaagttcatcccacgcggctacggtctggtcctgccgcgggcggat
cagggcgactggtcagctgccgtggcgcgactgcccggggatcgactgtatcaggatcag
cgccccagtcaggtgcatcgtgtgcaggccgggcagaccctgtccggcattgccatgcga
tatgacgtcgatgtcccgacgctgatggctgccaatggcctcgccgatccacgccggctg
cgggccggccagcgcctggatctgcccctcgccgggtccgaccctcgcagcgtgggccgc
cggcagtatgaagtccggccgggggacaccctcggtgccatcgcggtgcgtcacgatgtt
ggcaccgatcagctgatgcgtctgaatgaactcgatcatcccgaccggatccaagcgggc
cagcagctgattgtcagccgcgccgcgtcggtcgccgtggtcgacatggccgacgagccc
tga
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