Spiribacter roseus: BBH56_07345
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Entry
BBH56_07345 CDS
T06143
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sros
Spiribacter roseus
Pathway
sros00061
Fatty acid biosynthesis
sros00071
Fatty acid degradation
sros01100
Metabolic pathways
sros01212
Fatty acid metabolism
sros02024
Quorum sensing
sros04146
Peroxisome
Module
sros_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BBH56_07345
00071 Fatty acid degradation
BBH56_07345
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BBH56_07345
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBH56_07345
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sros01004
]
BBH56_07345
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sros04147
]
BBH56_07345
Enzymes [BR:
sros01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BBH56_07345
Lipid biosynthesis proteins [BR:
sros01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BBH56_07345
Exosome [BR:
sros04147
]
Exosomal proteins
Exosomal proteins of breast milk
BBH56_07345
Exosomal proteins of breast cancer cells
BBH56_07345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
PP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AUB78926
LinkDB
All DBs
Position
1497598..1500231
Genome browser
AA seq
877 aa
AA seq
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MDGNAEGLTIPALIRATPGTAQQPAVIAYTATGPVSVDYDRLLAMAEAHARSLGDAGLGR
GDRVLIQAPNSIEWIVIALATLIHGAVLVPVDAQMSHDDLAHVITDADPARIYITRALRP
ALPDSPTAAPIIELDSLDLTVPDDAPTAPAPRDEPAAGDTATLFYTSGTTGPPKGVPLTH
ANLVSNVRALLEARIAGSADRVLLPLPLHHVYPFSVGLLTVLGVGATLILPRSLVGPRIA
EALRAGRATILLGVPRLYEALWSRLEERLGGRRPWRQRLFHAAVGLSERLQSRLGWPLGR
WLFRPVMKRLAPALRLAVNGGAALDPVIARRLQGLGWTLASGYGLTETAPILTLNAPGEA
RLETAGRPLPGVSLRIVDGEVRARGPNVFAGYWHGAVSNAESFDAEGWFRTGDGGRIDSD
GYLHLSGRLSSTLVLTGGENIDPERIERVLNAQPAIREAGVLTHDGRLAAVIVAADTDDR
EETRQARIDAALRAARTDLPAHHAIGEVRLSADPLPRTRLGKLRRPHLARLFERLGGDQP
EIRQTPIDTEAMAPEDQALLADEAALATWRYLAGRFANRRLTPDSRLHQDLGLDSLGWMD
LGLALRDQVGIELDDAAIGRVETVRDLLQEVIHADPAALAAEGQAPATLTKQLADPEALL
DESSTRLLTPRGPLRYATARLALGACRQLNRRFARIEVEGEWPQDGPFLITPRHVSAYDP
IALTENLTRRQMEPLFWAGWTGLLFSSALRRTFSHVARILPIDPGAAPQRSLALAAAALQ
RGHSLVWFPEGQRGTDEALQPLRPGIGLLLAAHPVPVVPVWIEGTETVLPVGQLIPSHGV
IRIRIGEPLHPEQYGSDSRAIVASVSEALTALGEQSQ
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaacgccgaaggcctgacgatccccgccctcatccgggcgacaccggggacg
gcacaacagcccgcggtaatcgcctacaccgccaccgggccggtatccgttgactacgat
cgccttctggccatggctgaggcccatgcgcggagcctgggggacgccggactgggccgc
ggcgaccgggttctgatccaggcccccaacagcatcgagtggatcgtcatcgccctcgcc
acgctgatccacggtgcggtactggtgccggtggatgcccagatgagccacgatgacctg
gcccatgtgatcaccgacgccgatcccgcgcggatctacatcacccgggccctacgcccc
gcgctgccggattcccccaccgccgcgcccatcatcgagctcgattcgctggacctgacg
gtgcccgatgatgccccgacggcgccggcgccgcgggacgagcccgccgccggggatacc
gccacgctgttctacacctcgggcaccaccgggccgccgaagggggtgccgctcacccac
gccaacctggtcagtaatgtccgtgccctgcttgaggcccgtatcgccgggtcggccgat
cgggtgctgctgcccctgcccctgcaccatgtctatccgttcagcgtggggctgctgacg
gtgctcggcgttggcgcgacgctgatcctgccacgatccctggtgggcccgcgtattgcc
gaggcgctgcgggcgggccgggcgaccatcctgctgggtgtgccgcggctctacgaagcg
ctgtggagtcgactcgaggaacgcctcggcggtcggcggccctggcggcagcggctcttt
catgccgccgtcgggttgagcgagcggctccagtcacggcttggctggccgttggggcgc
tggctgttccgaccggtgatgaagcgtctggcgccagcattacgcctggccgtgaatggc
ggtgcggccctcgatccggtcatcgcccgacgcctgcaggggctgggctggaccctggcg
agcggctatgggctgaccgaaacagcgccgatcctgaccctcaacgccccgggagaggcg
cgcctcgagaccgccggtcggcccctgcccggcgtgtcactgcgcattgtcgacggcgag
gtacgcgcccgtggccccaacgtcttcgccggttactggcatggcgccgtgagcaatgcc
gagagctttgacgccgagggctggttccgcaccggggatggcggccggattgacagcgat
ggctacctgcacctcagcgggcgactgtcgtccaccctggtgctgacgggcggcgagaac
atcgaccccgagcgcatcgagcgggtattgaacgcacaaccagccatccgcgaggcgggt
gtgctgacacacgacggccggctcgccgcggtgatcgttgccgccgacacggatgatcgc
gaggagacacggcaggcacggatcgatgcggcgctgcgggcggcccgcactgatctgccc
gcccatcatgcgatcggcgaggtccgcctgagtgccgatcccctgccccggacccgcctc
ggcaagctgcgccgtccccacctggcgcgccttttcgagcgtctcggtggcgatcagcca
gagatacgccagacgcccatcgacactgaggccatggcacccgaagaccaggcgctgctc
gccgatgaagccgcgctggcaacctggcgatacctggccggccgcttcgcgaaccggcgc
ctgaccccggacagccgactccatcaggatctgggactcgactcgctgggatggatggac
ctgggactggcgctgcgtgatcaggtcggtatcgaactcgatgatgccgcgattggccgg
gtggaaaccgttcgcgacctcctccaggaagtgatccacgccgatccagcggcactcgcc
gccgagggacaggcaccggcaaccctgaccaagcagctggccgaccccgaggcgctgctc
gatgaatcatcaacccgcctgctcacaccccgcggtccactacgctacgccacggcccgg
ctggccctgggcgcctgccggcagctcaatcgacgcttcgcccggatcgaggtggaaggg
gaatggccgcaggacggcccattcctgatcaccccgcggcatgtcagcgcctatgacccc
atcgccctcaccgagaacctgacccgccggcagatggagccgttgttctgggcggggtgg
accgggctgctgttctcatcggccctgcgccgcacttttagccatgtcgcccggattctg
ccgatcgaccccggtgcggcaccacagcgcagcctggccctggcggcggcggcactgcaa
cgcggtcactccctggtgtggttcccggaagggcaacgcgggacggacgaagccctgcag
cccctgcggccgggcatcggcctgctcttggccgcgcatcccgtccccgtcgtgcccgtg
tggattgaggggacggagacagtgctacccgtcggccagctgatcccgagtcacggggtg
attcggatccggatcggcgagccgctccatcctgagcagtatggcagcgacagccgggcg
atcgtcgcgtcggtcagcgaagcgctgacggcgctcggtgagcaatcgcaatag
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