Staphylococcus roterodami: ML435_06905
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Entry
ML435_06905 CDS
T09562
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
srot
Staphylococcus roterodami
Pathway
srot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ML435_06905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srot03019
]
ML435_06905
03400 DNA repair and recombination proteins [BR:
srot03400
]
ML435_06905
Enzymes [BR:
srot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ML435_06905
Messenger RNA biogenesis [BR:
srot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ML435_06905
DNA repair and recombination proteins [BR:
srot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ML435_06905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
TrbI_Ftype
Motif
Other DBs
NCBI-ProteinID:
UMT74641
LinkDB
All DBs
Position
complement(1477077..1478456)
Genome browser
AA seq
459 aa
AA seq
DB search
MLYKALKDNFGFDSFKPGQQEIIESVLRHEHTLGILPTGSGKSLCYQLPTYLSNKPTLIV
SPLISLMDDQVMQLKINGEKRVACIHSGMDEIEKKHNIKCLRHSRFIFLSPEFLLQPANF
KLIYKIDFGMIVLDEAHCLSEWGYDFRPHYALIGKVTSHFKKAVVLALTATAPPHLQDDL
TKMLSIQFNVIKTTMNRPNISFKHFNFQNDEEKIEWLLPFLETSGPTIIYVSSKKMCLNL
AQMIYDSGFLTGIYHGNMNYQERQTVQQQFLNNDIPVIVATSAFGMGINKKDIRTIVHFH
LSTSPSNYIQEIGRAGRDGERSQAISLYQPDDRYILETLLFADMITKEDVQNFELGEFLP
PDKQHILTTLHSFYKIETLKQIFQKSFKRKQLGFFRMIGYSKLDQCRRKYLLEFFGEFPP
AQEQCCDNDSNMMDIVVLNKKKVIRSIGFEEKLQNLFPR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgttgtataaagctttaaaagataattttggatttgacagttttaagccaggacaacaa
gagataattgaaagtgtgttgaggcatgaacatacactaggtattcttcctactggaagc
ggcaaaagtctatgttatcaattaccgacatatctttctaataagcctacgttaattgta
tctccattaatttctttaatggatgatcaagtgatgcaattaaagattaatggtgaaaaa
cgtgttgcctgtattcactcaggtatggatgaaattgagaaaaagcataatattaaatgt
ttacgacatagccgcttcatctttttaagtccagaattccttttacaaccagctaatttt
aaattaatttataaaatagattttggcatgattgttttagatgaagcgcattgtttatca
gaatggggctatgattttagaccgcattatgcattaattggcaaagttacaagccatttt
aaaaaagctgtcgtattagctttgactgctacagcaccaccacatttacaagatgattta
acaaaaatgctatccattcaatttaatgttattaaaactactatgaatcgcccgaacata
agctttaagcattttaattttcaaaatgatgaagaaaaaattgagtggcttctgccattt
ctcgaaacctctggtccaacaattatttacgtatcttctaaaaaaatgtgtctaaatttg
gcacaaatgatatatgattctggttttctaacaggtatataccatggaaatatgaattac
caagaacgtcaaacggttcaacaacaatttttaaataatgatattccagttattgttgca
acgagtgcgtttggaatggggattaataaaaaagatatcagaaccattgttcattttcat
ctctcaacaagtccatcaaattacatacaagagattggtcgtgcaggacgtgatggtgaa
cgtagtcaggcaattagtttatatcaaccggatgataggtatattttagaaacattatta
tttgcagatatgattacaaaagaagatgtccaaaattttgagttaggtgaatttctacca
ccagacaagcaacatattttaacaacattacattctttctataaaattgaaacattaaaa
caaattttccagaaatcttttaaacgaaaacaattaggattctttcgtatgattggatat
agtaagttagaccaatgtagacgcaaatatttgttagaattttttggagaatttccacca
gcacaagagcaatgttgtgacaatgattcgaatatgatggatatagtggttttaaataag
aaaaaggtaattagaagtatcggttttgaagaaaagttgcaaaatttatttcctagatag
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