Staphylococcus roterodami: ML435_07315
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Entry
ML435_07315 CDS
T09562
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
srot
Staphylococcus roterodami
Pathway
srot02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
srot00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ML435_07315 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srot03021
]
ML435_07315 (rpoD)
Transcription machinery [BR:
srot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ML435_07315 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
UMT74713
LinkDB
All DBs
Position
complement(1551297..1552403)
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AA seq
368 aa
AA seq
DB search
MSDNTVKIKKQTIDPTLTLEDVKKQLIEKGKKEGHLSHEEIAEKLQNFDIDSDQMDDFFD
QLNDNDISLVNEKDSSDTDEKLNPSDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIEL
AKRIEQGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFNKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIG
EEMDLPAEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KRLKDFMD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataacacagttaaaattaaaaaacaaacaattgatccgactttaacattagaa
gatgttaagaagcaattaattgaaaaaggtaaaaaagagggtcatttaagtcatgaagaa
attgctgaaaaacttcagaatttcgatatagactcagatcaaatggatgatttctttgat
caattaaatgataatgatatttcattagtaaatgaaaaagatagttcagatactgacgag
aaacttaatccaagtgatcttagtgcccctccaggtgttaaaataaatgacccagttcgt
atgtatcttaaagaaattggtcgtgtaaacttattaagtgcacaagaagaaattgaatta
gctaagcgtattgaacaaggtgacgaagtagcaaaatcacgacttgcagaagctaactta
agattagtagtaagtattgctaaaagatatgtaggtcgtggtatgttattccttgattta
attcaagaagggaatatggggcttattaaagcagttgaaaaatttgactttaataaaggt
tttaagttttcaacttatgcgacatggtggattcgacaagctatcactcgtgcaattgct
gaccaagcacgtacaattcgtatcccagtgcatatggtcgaaacaattaacaaattaatt
cgtgtacaacgtcaacttttacaagatttaggtcgtgatccagcacctgaagaaattggt
gaagaaatggacttgccagctgaaaaagttcgtgaaattttaaaaattgctcaagagcca
gtttctttagaaacaccaattggtgaagaagatgacagtcatttaggcgactttattgaa
gatcaagaagcgcaaagtccatcagaccatgccgcatatgaattattgaaagaacaatta
gaagatgtgcttgatacattaacagatagagaagaaaatgtattacgtctaagatttggt
ctagatgatggtagaacaagaacgcttgaagaagtagggaaagttttcggagtaacacgt
gaacgtatccgtcaaattgaagcaaaagcacttagaaaattaagacatccaagtcgtagt
aaacgtttgaaagactttatggattaa
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