Staphylococcus roterodami: ML435_07440
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Entry
ML435_07440 CDS
T09562
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
srot
Staphylococcus roterodami
Pathway
srot03030
DNA replication
srot03430
Mismatch repair
srot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ML435_07440 (holA)
03430 Mismatch repair
ML435_07440 (holA)
03440 Homologous recombination
ML435_07440 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srot03032
]
ML435_07440 (holA)
03400 DNA repair and recombination proteins [BR:
srot03400
]
ML435_07440 (holA)
Enzymes [BR:
srot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ML435_07440 (holA)
DNA replication proteins [BR:
srot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ML435_07440 (holA)
DNA repair and recombination proteins [BR:
srot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ML435_07440 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
YtxK_like
Sigma54_activ_2
PEX11
DUF3781
DUF2018
Motif
Other DBs
NCBI-ProteinID:
UMT74737
LinkDB
All DBs
Position
complement(1576922..1577896)
Genome browser
AA seq
324 aa
AA seq
DB search
MSDNIVAIYGDVPELVEKQSKEIISQFLKDDRDDFNFVKFNLYETEIAPIVEETLTLPFF
SEKKAILVKNAFLFTGEKSPKDMTHNVDQLIEFIEKYDGENLIVFEVYQNKLDERKKLTK
TLKKHAKLKKIEQMSEEDIKKWIQRKLNENFKDIKRDALDLFIELTGINFNIVSQELEKL
ILFLGDRPTINKQDVNQIINRSLEQNVFLLTEYIQKRKKEQAILLVKDLITMKEEPIKLL
ALIISNYRLFYQCKILSQKGYSGQQIAKTIGVHPYRVKLALGQVRHYRLDELLNIMDACA
ETDYKLKSSYMDKHLILELFILSL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaatattgtagctatttatggagatgtacctgaattggttgaaaagcaaagt
aaagaaattatttcgcaatttttaaaagatgatagagatgattttaactttgtgaaattc
aatttatatgaaacagagattgcaccaattgtagaagaaacattaacattgcctttcttt
tcagaaaaaaaagcaatattggttaaaaatgcatttttatttactggtgaaaaatcaccg
aaagatatgacgcataatgtagatcaattaatagagtttattgaaaaatacgatggtgaa
aatttaatagtttttgaggtatatcaaaacaaacttgatgagagaaagaaattaacaaaa
acattaaaaaaacacgctaagttaaagaaaatcgaacaaatgtctgaagaagatattaaa
aaatggattcaaaggaaactaaatgaaaattttaaagatataaagcgtgatgcgttagat
ttatttattgaattgacaggtatcaactttaatattgtttctcaagaattagaaaaatta
attttatttttaggtgacagaccaacaattaataagcaagatgttaatcaaattattaac
agaagtttagagcagaatgtattcttgcttacagaatacatacagaaaagaaaaaaggaa
caagcgattcttctagttaaagatttaattactatgaaagaagagcctataaagttactt
gcattaattataagtaactatcgtttgttttatcaatgtaagattttaagtcaaaaagga
tatagcggtcaacaaattgctaaaacgataggtgttcatccatatagggtcaaattagct
ttaggtcaagtaagacattacagacttgatgaattgttaaatataatggatgcttgtgca
gaaactgattacaaattaaagtcatcttatatggataaacatttaattctagaattattc
attttatcgctataa
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