Staphylococcus roterodami: ML435_07680
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Entry
ML435_07680 CDS
T09562
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
srot
Staphylococcus roterodami
Pathway
srot03410
Base excision repair
srot03430
Mismatch repair
srot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ML435_07680 (recJ)
03430 Mismatch repair
ML435_07680 (recJ)
03440 Homologous recombination
ML435_07680 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srot03400
]
ML435_07680 (recJ)
DNA repair and recombination proteins [BR:
srot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ML435_07680 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ML435_07680 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ML435_07680 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UMT74781
LinkDB
All DBs
Position
complement(1623068..1625341)
Genome browser
AA seq
757 aa
AA seq
DB search
MIKPKYKWKLKKPTEYINEETISKFKLTPIVKKILESKAIVDEQDIQSIIADIDINHDPN
QLSDMSKAVERIKNAISNDEKILVYGDYDADGVTSTTILVTTLKLLGAQVGWHIPNRFTE
GYGPNELAFRNAHDEGISLIITVDNGIQGHNEIKMVQELGVDVIVTDHHEIGRTLPEAYA
IVHPMHPAFDYPFQQLCGAGVAYKLSQALIGNVPDYFKALVAIGTIADLVSLTDENRSLV
KQGLKILNDNCPVSIKALLQEAGYNDHIDEETIGFIIGPRLNAVGRLDDASLACELLMTE
DEEEASFLAEQVEHFNRERKDIVASITEEAMAMADEQVKAGNLFLLLAKENWHEGVLGIV
ASKIVETYALPTLILNIDREQNHAKGSARSIDQVSMFEILSAHQDLIAKFGGHHMAAGMT
MDIENVDILANGLNEWMKALAETTSLDPVKPVDVLLTENDITIKNICDMNRLRPFGTDFS
RPLFEMDDLSVSSVKAIGQQKNHLKMTLGDSNIAALFWQNGHLETELQDKQPINILGSVQ
INEWNGNQTPQLIIQDIAMNEQQILDYRSKRKSLPFTENDENIVVLIHPKSDKVNANEYY
YGEEINQQSDKVVLRDLPTSMDDLSNTLRQLQFSQLYLVLQHSHSIYFEGIPHMNVFKKC
YKALINKQETNIQQEGMLLCQHLNVKPDALKFMLKVFLDLNFITQKDGTIYINKRPDKRA
IDSSKVYQLRQQRMDVEKQLLYQDFSELKNWIKSQLS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaccaaagtataagtggaaattaaaaaaaccaactgaatacataaacgaagaa
acaatatctaaatttaaattgacgccaattgtgaagaaaatattagaaagtaaggcaatt
gttgatgaacaagatattcaatcaattattgcagacatagatataaatcatgatccaaat
caactaagtgacatgagtaaggccgttgaaagaattaaaaatgcaatatctaatgatgaa
aaaatcttagtatatggagactatgacgctgatggtgtaacttcaacgactattttagtt
acgacattaaagcttttaggcgcacaagtaggttggcatatacctaatcgttttactgaa
ggatatggtccaaatgaattagcatttcgaaacgcacacgatgaaggtatctctttaata
attacggttgataatggtatacaaggtcataacgaaattaaaatggttcaagaactcggt
gttgatgtaattgttactgatcaccatgaaataggtagaacattaccagaagcatatgca
attgtgcatccgatgcacccggcatttgattatccatttcaacaattatgtggtgccggc
gtagcttataaattgtctcaagcgctaataggaaatgtacctgactactttaaagcgtta
gtagctataggtaccatagcagacttggtttcgttaacggatgaaaatcgttcactcgtg
aaacaaggtttgaaaatattaaatgataattgtccagtatctattaaagcattgcttcaa
gaagcggggtacaacgatcacattgatgaagagacaataggctttatcattggaccaaga
ttaaatgctgtagggcgtttagatgatgcttcattagcttgtgaattactgatgacagaa
gatgaagaagaagcctcatttttagcagaacaggtagaacattttaatcgcgaaagaaag
gatattgttgcatctattactgaagaagcaatggctatggctgatgaacaagttaaagca
gggaatttattcctactgcttgcgaaagaaaattggcatgaaggtgtgttaggtattgtg
gcgtctaaaattgttgaaacatatgcattaccgacacttattttaaatattgatagagaa
caaaatcatgcaaaaggttcagcgagatcaatcgatcaagtgtctatgttcgaaatatta
tcagcacatcaagatttaattgctaagtttggtggtcaccatatggctgcaggtatgacg
atggatattgaaaatgttgatattttagctaatggattgaatgaatggatgaaagcttta
gctgaaacaacatcacttgatcctgtgaaaccagtagacgttttattaacagagaatgac
ataacaattaaaaatatatgtgatatgaatcgtttgcgaccatttggaacagatttttct
agaccattatttgaaatggacgatttatcagtttcatcggttaaagcaattggtcaacaa
aaaaaccacttgaaaatgacattaggtgacagtaatatagcagcattattttggcaaaat
gggcatttagaaacagaattacaagacaaacaaccaatcaatattttgggctctgttcaa
ataaatgaatggaatggcaatcaaacaccacaattaatcattcaagatatagcgatgaat
gaacaacaaatattagattatcgaagtaaaagaaaaagtttaccttttacagaaaatgat
gaaaatattgtcgtgcttattcatcctaaaagtgataaagtaaatgcgaatgaatattat
tatggggaagaaattaatcagcagtcggataaagttgtgttaagagatttgccaacttca
atggatgacttgtcaaatacattacgacagctacaattttctcaactctatttagtttta
cagcatagtcattcgatttatttcgaaggtatacctcatatgaatgtctttaaaaaatgt
tataaagcactaattaataaacaagaaacaaatattcaacaagaaggcatgttgttgtgt
cagcatttaaatgttaaaccagatgcacttaaattcatgctcaaagttttcttagattta
aactttataacacaaaaagatggtacgatttacattaataaacgaccagataaaagagca
attgattctagtaaagtatatcaattaagacaacaacgtatggatgtagaaaagcaatta
ttgtatcaagatttttcagaattaaaaaattggataaagtcacaattgtcgtga
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