Staphylococcus roterodami: ML435_10125
Help
Entry
ML435_10125 CDS
T09562
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
srot
Staphylococcus roterodami
Pathway
srot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ML435_10125 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srot03021
]
ML435_10125 (rho)
03019 Messenger RNA biogenesis [BR:
srot03019
]
ML435_10125 (rho)
Transcription machinery [BR:
srot03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ML435_10125 (rho)
Messenger RNA biogenesis [BR:
srot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ML435_10125 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
Mor
AAA
AAA_25
Spore_III_AA
YopJ_bacilli
Motif
Other DBs
NCBI-ProteinID:
UMT75186
LinkDB
All DBs
Position
complement(2080807..2082123)
Genome browser
AA seq
438 aa
AA seq
DB search
MPERERTSPQYESFHELYKNYTTKELTQKAKTLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERILLETETKNYSTRIMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVGERPEEVTDLERSVEAAEVVHST
FDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLSE
RRIFPAIDIGRSSTRKEELLISKSELDTLWQLRNLFTDSTDFTERFIRKLKKSKNNEDFF
KQLQKSAEESTKTGRPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaagagaacgtacatctcctcagtatgaatcattccacgaattgtacaagaac
tatactaccaaggaactcactcagaaagccaaaactcttaagttaacaaactacagtaaa
ctaaataaaaaagaacttgtccttgctattatggaagcacaaatggaaaaagatggtaac
tattatatggagggtattttagatgatatccaaccagacggttacggttttttaagaaca
gttaactattctaaaggggaaaaagatatttatatctctgcgagtcaaattcgtcgtttt
gaaattaaacgtggcgataaggttacagggaaagttagaaagcctaaagacaatgaaaaa
tattatggcttattacaagttgattttgtcaatgatcacaatgcagaagaagtgaagaag
cgtccacatttccaagcattaacaccattgtatccagatgaacgaattttattagagact
gaaacgaaaaattattcaacacgtataatggatttagtaacaccgattggtctaggtcaa
cgtggtttaatcgtagcacctcctaaagcgggtaaaacgtcgttattaaaagaaattgca
aatgcaattagtacaaataaaccagatgcaaagctatttattttgttagttggcgagcgt
cctgaagaggtaacagatttagaacgctcagtagaagctgctgaagtcgttcattcaacg
tttgacgaaccaccagaacatcatgttaaagtagctgaattattacttgaacgtgcaaag
cgtttagtagaaattggggaagatgtcattattttaatggattctataacgagattagca
cgcgcttataacttagttattccaccaagtggtcgtacattatcaggtggtttagatcct
gcatctttacacaaaccaaaagcattcttcggtgcagcgaggaatattgaagcaggtgga
agtttaacaatacttgcaactgcattagttgatacgggttcacgtatggacgatatgatt
tacgaagaatttaaaggaacaggtaacatggagttacatttagatcgtaaattatctgaa
cgtcgtattttcccagctatcgatatcggccgaagctcaacacgtaaagaagaattgttg
attagtaaatctgaattagacactttatggcaactaagaaatctgttcactgattcaact
gacttcactgaacgttttattagaaagcttaaaaagtcgaagaacaatgaagacttcttc
aaacaattacaaaaatctgcagaagaaagtactaaaacaggtcgtccgataatttaa
DBGET
integrated database retrieval system
