Streptococcus suis ST1 (serotype 1): SSUST1_0565
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Entry
SSUST1_0565 CDS
T02125
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
srp
Streptococcus suis ST1 (serotype 1)
Pathway
srp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SSUST1_0565 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srp03400
]
SSUST1_0565 (fpg)
Enzymes [BR:
srp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SSUST1_0565 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SSUST1_0565 (fpg)
DNA repair and recombination proteins [BR:
srp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SSUST1_0565 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Auto_anti-p27
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AER20958
LinkDB
All DBs
Position
567502..568329
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGATVFCQDLIGQEILDVDRRGKYL
LIYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFSDGSTLVYQDVRKFGTMELLGK
ADVDAYFISRKIGPEPTEEDFDLEEFAKQLAKSRKPIKSHLLDQSLVAGLGNIYVDEVLF
RAQVHPAQASNQLSAEQAADLRQATIEVLQLGIEKGGSTIRTYKNALGMDGTMQDYLQVY
GKTGQACPRCQTEIVKIQLGGRGTHFCPTCQVKYG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcctgaggttgagacggttcgtcgtggtttaaatcggttggtcaaggga
aaggttatttccaaggtggaggtgacctatgcccctatgattaagactggtgctactgtt
ttctgccaagacttgattggtcaggagattttagatgtggaccgtcgtggcaagtatctc
ttgatttacctgacagaccatgtccttatttctcacttgcggatggaaggtaagtacaat
ttctttcctgaccaggtgcctgccaacaaacatttccatgccttttttactttttcagat
ggctcgaccttggtttatcaggatgtccgcaagtttggcacaatggaactgctgggcaag
gcagatgtggatgcctattttatcagtcgaaaaattggtcctgagccgacggaggaagat
tttgacttagaagaatttgccaaacagttagctaagtcgagaaagcccattaagtcgcat
cttttggaccagtctttggtggctggtttgggcaatatctatgtagatgaggttctgttt
agagcacaagttcatcctgctcaagcaagtaatcagctatcggcagagcaggcggcagac
ctccgtcaagctaccatagaagttctgcaactgggtattgaaaaaggtggttcaaccatt
cggacttacaaaaatgccttgggcatggatgggactatgcaggattatttacaagtttat
ggaaagacaggacaggcttgtccccgttgccagacagagattgtcaaaatccagctgggt
ggtcgagggacacatttctgtcccacgtgtcaggtgaaatatggctaa
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