Streptococcus suis ST1 (serotype 1): SSUST1_1623
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Entry
SSUST1_1623 CDS
T02125
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
srp
Streptococcus suis ST1 (serotype 1)
Brite
KEGG Orthology (KO) [BR:
srp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srp03019
]
SSUST1_1623
03009 Ribosome biogenesis [BR:
srp03009
]
SSUST1_1623
Enzymes [BR:
srp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SSUST1_1623
Messenger RNA biogenesis [BR:
srp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SSUST1_1623
Ribosome biogenesis [BR:
srp03009
]
Prokaryotic type
rRNA helicases
SSUST1_1623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AER21972
LinkDB
All DBs
Position
complement(1571159..1572502)
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AA seq
447 aa
AA seq
DB search
MKFTDMKLKPYIQEALKEINFVQPTEVQEKLIPVVLSGRDLIGESKTGSGKTHTFLIPIF
QKLNEELDQVQAVIPAPSRELATQIYQAARQLASHSDIEVRVTNYVGGTDKNRQIDKLQA
SQPHIVVGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIAGSLPKDLQF
MVFSATIPQKLQPFLKKYLSNPVMEQIKTHTVISDTIENWLISTKGRDRNAQILEVTKLM
QPYLAMIFVNTKTRADELHSYLTANGLRVAKIHGDIPPRERKRMMNQVKNLDYQYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGFAITLYQPSDDADIRELEKL
NIKFLPKEMKNGEFVDTYDRDRRANREKSREKLDLEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKTKRVEARAKGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagatatgaaactcaagccttatattcaggaggctttgaaagaaattaac
tttgtccagccgacagaagttcaggagaaattgattcctgttgttttgtcagggagagac
ttgataggggaatcaaaaacaggttcgggtaagacccataccttcttgatcccgattttc
caaaaattaaatgaggaattggaccaagttcaggctgttattccagccccatctcgtgaa
ctggctactcagatttatcaagcggcacgccagttggctagtcattcggatattgaagtt
cgtgtgaccaattatgttggcggtacggataagaaccgtcaaattgacaagcttcaagct
agtcagcctcacattgttgttgggacaccagggcgtatctatgatttggtcaaatcaggt
gaccttgctatccataaagccaaaacctttgtggtggatgaggcagatatgaccttggac
atgggctttttggaaacagttgataagattgctggcagcctgccaaaagacttgcaattt
atggtcttttcagcgaccattccgcagaaactccaaccgtttttgaaaaaatacttgtcc
aatccagtcatggaacaaatcaagacccatacggtcatttcggataccattgaaaactgg
ctgatttcaaccaaggggcgtgaccgtaatgctcaaatcttggaagtaaccaagctcatg
caaccttacttggccatgatttttgtcaatacgaagacacgtgcagatgaattgcatagc
tatttgactgcgaatggtcttcgtgtcgcaaagattcatggggatattcctccacgtgag
cgcaagcggatgatgaaccaggtgaagaacttggactatcagtacattgttgcaacggat
ttagcagcacgtgggattgacattgagggcgtcagtcatgtcatcaatgatgcaattcct
caagacctttccttctttgtccaccgtgtggggcgcacaggtcgtaatggtttatcaggc
tttgccattaccctttatcagccaagtgatgatgcagatattcgagagctggaaaaactc
aatatcaaattcttgccaaaagaaatgaaaaatggcgaatttgtcgatacctacgaccgt
gaccgccgtgctaaccgtgaaaaatctcgtgaaaaactagatttggaaatgattggcttg
gtcaagaagaaaaagaaaaaagtcaaaccaggctacaagaagaaaattcaatgggctgtt
gatgaaaaacgtcgcaagaccaagcgagttgaagcgcgtgcaaagggtcgtgcagaacgt
aaagccaagcgtcaaaccttttaa
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