Streptomyces sp. RPA4-5: HEP86_02255
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Entry
HEP86_02255 CDS
T10325
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa03420
Nucleotide excision repair
srpa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HEP86_02255
03430 Mismatch repair
HEP86_02255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srpa03400
]
HEP86_02255
Enzymes [BR:
srpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP86_02255
DNA repair and recombination proteins [BR:
srpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEP86_02255
MMR (mismatch excision repair)
Other MMR factors
HEP86_02255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QIY53529
UniProt:
A0A6H1JRB5
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All DBs
Position
complement(464538..466349)
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AA seq
603 aa
AA seq
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MTTEAEDITRTILTALQAGRHFKVEAGAGAGKTSSLIKALQSILADRARYLPRPHQRVAC
VTYTNVARDEIISRTDRSPYVFAETIHGFLWQLLSPFRKHLLCHIVELDIMLSKMEGHTS
LDGYTVEYSTGFQKVDHDTRRVQLGHNDLPVLARAFFALPKFRALAADRFPIVFVDEYQD
TPAGLAEAMLGTPGDEATARGPLCGFFGDHWQQIYDNACGALEDARPTPVFRRRNRRSQR
AVVNLLNTMRPELTQTTASGVGEGTVAVYHTNEWAGTRLTHHRKGQLGWNAAHAARKWVL
DDVRDRFWSTGASGHVAQARAEDPSTKILMLTHETIAGELGYQKLHGAFQRNDSYVRKEV
HAMAFFMDTLEPALLHHRNKRYGAMFDALDPRGRPPINSPADKQEWMAFLTKLGEAREMG
TVGDVLDLCLEQQLFDGLGKVRERHRKAVSPSGIDPQAVSGGKAEARAAARSKEYQQLRQ
VPYSELLALNEHVGGGTPFATQHGVKGLEFNRVLAVVSKGHSRFQIPEMLANFSRRDELM
DRELEAFIRARNLFYVACSRAREHLAILFTTKLEPAALDTLREWIGQSRITSLRFDGDTV
MGG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccgaggcggaagacatcacgcgcacgatcctgacggctctccaggcaggccgt
cacttcaaggtggaggccggtgccggtgcgggcaagaccagctcactgatcaaggcgctc
cagagcatcctggctgaccgcgcccgctatctcccgcggccccaccagcgcgtcgcctgc
gtcacctacaccaatgtggcccgcgacgagatcatcagccgtaccgaccgcagcccgtac
gtgttcgccgaaaccatccatggcttcctgtggcagctgctctcccccttccgtaagcat
ctgttgtgccacatcgtcgagctggacatcatgctgtcgaagatggagggccacacctcg
ctggacggctacaccgtcgagtacagcaccggcttccagaaagtggaccacgacacccgt
cgcgtgcagctgggtcacaacgatctgcccgtcctcgcgagggcgttcttcgcccttccc
aagtttcgggccctggcggccgaccggttcccgatcgtcttcgtggacgagtaccaggac
acccccgccggtctggcggaggccatgctgggcacgccgggcgatgaggccaccgcgcgt
ggccccctctgcggcttcttcggggaccactggcagcagatctacgacaacgcgtgcggg
gcactcgaggacgcccgcccgacaccggtcttcaggcggcgcaatcggcgctcgcagcgc
gccgtcgtgaacctcttgaacacgatgcgtcctgaactgacgcagaccactgcgtcagga
gttggcgagggcaccgtcgccgtctatcacaccaatgaatgggccgggacaaggctcacc
caccaccggaagggtcagctcggctggaatgcggcccacgcggcccggaaatgggtactg
gacgacgtccgcgaccggttctggagcaccggggcatccggtcacgtagcccaggcacgg
gcggaggaccccagcacgaagattctcatgctcacgcacgagacgatcgccggcgaactg
ggatatcagaagctccacggggcctttcagcgcaacgattcctatgtgaggaaggaggtc
catgccatggccttcttcatggacacgctggaaccggccctgctccaccaccggaacaag
cgctacggcgcgatgttcgacgcactcgacccccgtggtcgtccacccatcaactcgccg
gccgacaagcaggaatggatggcgttcctgacgaagctgggggaggcccgcgagatgggc
acggtcggcgacgtcctcgacctctgtcttgagcagcagctcttcgacggcctggggaag
gtgcgcgagcgtcaccggaaggccgtgtcaccatctggcatcgacccgcaggctgtgagt
ggcggcaaggccgaagcccgggcggcggcgcggtcgaaggagtatcaacaactgcgccag
gtgccgtactcggagttgctggcgttgaacgagcacgtcggcggtggcacacccttcgcc
acacaacacggagtcaagggactggagttcaaccgggtcctcgccgtggtcagcaaggga
cattcccgcttccagattcccgagatgctggccaacttctcccggcgcgacgaactgatg
gatagggaactggaggcgttcatcagggcccgcaacctcttctacgtggcatgctcacgg
gccagagagcacctggccatcctcttcaccacgaaacttgagcccgctgcactggacacc
ctccgggagtggatcggtcagtcgcggatcacgtcgctgcggttcgacggggatacggtg
atgggtggctaa
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