Streptomyces sp. RPA4-5: HEP86_03025
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Entry
HEP86_03025 CDS
T10325
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HEP86_03025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srpa02000
]
HEP86_03025
Transporters [BR:
srpa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HEP86_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QIY53634
LinkDB
All DBs
Position
complement(631843..633048)
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AA seq
401 aa
AA seq
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MPVCSLCPLVYPSGETVPEFLPRSAVIAGGLVATTLVLSACGAGPDASTNADGESAATAI
TAEDFGGMDALIKAAKAEGTLNAIALPRDWANYGALIDGFEKKYGIKVKVENPDGASQDE
INAVTSRKSKDKDRAPDVLDLGSSFAYSAAQQNLLAQYMVTDFIDIPDGQKDTMSRWYHG
YGGYISIGCDARRVKTCPTTFKDLLKPEYKGKVALNGDPNKSGSAFGSVYAAALANGGSF
DYIQPGIDFFTKLRKNGNYTPVQSTGATIVKGRTPIVLDWDYLNARYTDKLKSRGVDWQV
AVPEDGKFSEFYSQAINENAPHPAAARLWQEYLYSAEGQNLWLKGYARPALMAAMEKNGT
LDKTAAAKLPKVSGTPSFPSEAQLGHAKDDIAEGWGKPAPR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtctgttccctgtgcccccttgtgtacccctctggagagaccgtgcccgagttc
ctgccgagatccgccgtcatcgccggcggcctcgtcgccaccacactcgtcctcagcgcc
tgtggcgcgggccccgacgcgtcgaccaacgccgacggagagagcgcggccaccgcgatc
acggccgaggacttcgggggcatggacgcgctcatcaaggcagccaaagcggaaggcacc
ctgaacgccatcgcgcttccccgcgactgggccaattacggcgcgctgatcgacggcttc
gagaagaagtacggcatcaaggtcaaggtggagaacccggacggcgccagccaggacgag
atcaacgccgtcacctcccgcaagagcaaggacaaggaccgggcacccgacgtcctcgac
ctcggcagctccttcgcgtacagcgccgcccagcagaatctgctcgcgcagtacatggtc
accgatttcatcgacatccccgatggccagaaggacacgatgagccgctggtaccacggc
tacggcggctacatctccatcggctgcgatgcccgtcgcgtgaagacctgcccgaccacc
ttcaaggatctgctcaagccggagtacaaggggaaggtcgcgctcaacggcgaccccaac
aagtccggttcggccttcggcagtgtgtacgcggccgccctcgccaacggtggctccttc
gactacatccagcccggcatcgacttcttcaccaagctcagaaagaacggcaactacacg
cccgtccagtccaccggggccaccatcgtgaagggccggacgccgatcgtcctcgactgg
gactacctcaacgccaggtacaccgacaagctcaagagcaggggagtcgactggcaggtc
gcggtcccggaggacggcaagttctcggagttctactcgcaggccatcaacgagaacgcc
ccgcacccggcggccgcccgactgtggcaggagtacctctacagtgccgagggccagaac
ctctggctcaagggctacgcccgcccggctctgatggccgccatggagaagaacggcacg
ctcgacaagacggcggccgccaagctgccgaaggtctccggcacgccgagcttcccgagc
gaggcgcagctgggccatgccaaggacgacatcgccgagggctggggcaagcccgccccc
cgatag
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