Streptomyces sp. RPA4-5: HEP86_08205
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Entry
HEP86_08205 CDS
T10325
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HEP86_08205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srpa03400
]
HEP86_08205
Enzymes [BR:
srpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP86_08205
DNA repair and recombination proteins [BR:
srpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HEP86_08205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
QIY54498
LinkDB
All DBs
Position
complement(1819879..1822017)
Genome browser
AA seq
712 aa
AA seq
DB search
MSRENGRPEAGAADAGEQLALIREAVRETKAERAKPRTWRGAELAAELPVARVLVDKGLV
HLDRYFDYAVPAAMDHEAQPGVRVRVRFGAGEKGGRREGGKLVSGFIVERVAESDYRGVL
APVAQVLSSERVLTPELLALCRSVADRYAGTLADVVQLAVPPRRARAEAKPSPAPLPPNP
PPEPGSWERYGAGVGFLAALTRGDAPRAVWTALPGPTWPQELARAAAAALAGGRGALVVV
PDGRAAARVDAALGELIGEGRHVLLTADAGPEERYRRWLAVSRGAVRAVVGTRAAMFAPV
ADLGLVALWDDGDASHSDPHAPQPHAREVLIQRSVHERAGFLLGGLSCTVEAAQLVETGW
ARALTAEREQVRAAAPLVRTVGDGDEARDAAARAARLPSMAWQVVRDGLRRGPVLIQVPR
RGYAPRLACERCRTPARCRSCAGPLEAQDAGELCCAWCGRPEPDWHCSECGGARLRAQIV
GARRTAEELGRVFPAVPVRTSGRDHVLATVPGAPALVVSTPGAEPVAEGDGYAAALLLDG
WALLGRPDLRAGEEALRRWLGAAALVRGQAAGGTVAVIAEPTLRPVQALVRWDPVGHAVR
ELAERAELGFPPVSRMAAVAGRADDVTELLGSAELPAGAEVLGPVPLPVPDPARPRRPGD
PPPGEQWERALVRVRPGQGAALAAALKAARAARLVKREGEAVRVRIDPPDLG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagggagaacgggcgaccggaggcgggggcggcggatgcgggcgagcagttggcc
ctcatccgggaggccgtgcgggagaccaaggcggagcgggcgaagccgcggacctggcgg
ggggccgagctggcggccgagctgccggtggcgcgggtgctggtcgacaaggggctggtg
cacctcgaccggtatttcgactacgcggtcccggcggcgatggatcacgaggcgcagccc
ggcgtccgggtccgggtgcgcttcggggcgggggagaagggcggccggcgcgagggcggc
aagctggtcagcggcttcatcgtggagcgggtcgcggagagcgactaccggggggtgctc
gccccggtcgcgcaggtgctgtcgtccgagcgggtgctgacgccggagctgctggcgctg
tgccggtcggtcgcggaccgctatgccgggacgctcgccgatgtggtgcagctggcggtg
ccgccccgacgggcgcgcgcggaggccaagccctcgcccgccccgctgcctcccaacccg
cccccggaaccgggaagttgggagcgctacggcgccggcgtcgggtttctggccgcgctc
acccggggggacgcgccgcgggcggtgtggacggcgctgcccgggccgacctggccgcag
gagctggcgcgggcggcggccgcggcgctggcgggcggccgcggcgcgctggtggtggtg
ccggacgggcgggccgcggcgcgggtggacgcggccctcggcgagctgatcggagagggc
cggcatgtgctgctgaccgccgacgccgggcccgaggagcgctaccgtcgctggctggcg
gtcagccggggcgcggtgcgcgccgtggtggggacccgggcggcgatgttcgcaccggtc
gccgacctgggcctggtcgccctctgggacgacggggacgccagccacagcgatccgcat
gcgccgcagccccatgcccgtgaggtcctcatccagcggtcggtccatgagcgggcggga
tttctgctgggcgggctgagctgcacggtcgaggcggcccagctggtcgagacgggctgg
gcgcgcgcgctgaccgccgagcgcgaacaggtccgggccgcggcgcccctggtgcgtacg
gtcggcgacggcgacgaggcgcgggacgccgccgcgcgggccgcccggctgccgtcgatg
gcctggcaggtggtgcgggacggcctccggcgcggaccggtgctcatccaggtcccgcgc
cggggatacgcgccccggctggcgtgcgaacggtgccgtacccccgcgcgctgccggtcc
tgcgcgggcccgctggaggcgcaggacgccggcgagctgtgctgtgcgtggtgcggccgc
ccggagccggactggcactgctccgagtgcggcggcgcgcggctgcgggcgcagatcgtg
ggggcgcggcgaacggcggaggagctgggccgggtgttcccggcggtgccggtgcggacc
tcggggcgggaccatgtgctggccacggtgccgggtgcccccgcgctcgtggtgagcacc
ccgggcgcggagccggtggccgagggtgacgggtatgcggccgcgttgctgctggacggc
tgggcgctgctggggcggccggacctgcgggcgggcgaggaggcgctgcgccgctggctg
ggcgccgccgcattggtccgcggccaggcggcgggcggcacggtcgcggtgatcgcggag
ccgacgctgcggccggtgcaggcactggtgcgctgggatccggtcggccatgcggtccgt
gagctggccgagcgggccgagctgggctttccgccggtgtcgcggatggctgccgtggcc
ggccgcgccgacgatgtcaccgagctgttgggatccgccgaactccccgcgggcgccgag
gtgttgggccccgtaccccttccggtgccggaccccgcccgcccgcgccggccgggcgac
ccgccgccgggcgagcagtgggagcgtgcgctggtccgggtccgccccggccagggcgcg
gccctcgccgccgcgctcaaggccgcccgtgcggcccggctggtcaagcgggagggggag
gccgtacgggtccggatcgatccgcccgatctggggtga
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