Streptomyces sp. RPA4-5: HEP86_08245
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Entry
HEP86_08245 CDS
T10325
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa00220
Arginine biosynthesis
srpa00240
Pyrimidine metabolism
srpa00250
Alanine, aspartate and glutamate metabolism
srpa01100
Metabolic pathways
srpa01110
Biosynthesis of secondary metabolites
srpa01240
Biosynthesis of cofactors
Module
srpa_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HEP86_08245 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HEP86_08245 (carB)
00220 Arginine biosynthesis
HEP86_08245 (carB)
Enzymes [BR:
srpa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HEP86_08245 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MGS
CPSase_L_D3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp
ATP-grasp_4
ATP-grasp_3
CoA_binding_2
DJ-1_PfpI
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
QIY54506
UniProt:
A0A6H1JIH2
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All DBs
Position
complement(1828515..1831826)
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AA seq
1103 aa
AA seq
DB search
MPKRTDIQSVLVIGSGPIVIGQAAEFDYSGTQACRVLKAEGLRVILVNSNPATIMTDPEI
ADATYVEPITPDFVEKIIAKERPDALLPTLGGQTALNTAISLHGSGTLDKYNVELIGANV
EAINKGEDRDLFKDVVEAVNRKIGHGESARSVICHSMDDVLAGVDELGGYPVVVRPSFTM
GGAGSGFAHNEEELRRIAGQGLTLSPTTEVLLEESILGWKEYELELMRDKNDNVVVVCSI
ENFDPMGVHTGDSITVAPAMTLTDREYQILRDVGIAIIREVGVDTGGCNIQFAVNPDDGR
VIVIEMNPRVSRSSALASKATGFPIAKIAARLAVGYTLDEIPNDITEKTPASFEPTLDYV
VVKVPRFAFEKFPAADATLTTTMKSVGEAMAIGRNFPEALNKALRSLEKKGSQFDFVSEP
GDKAALLEKSQVPTDGRINTVMAAIRAGATPQEVFDATKIDPWFVDQLFLVKEIADEIAA
ADKLDPEILADAKRHGFSDAQIAAIRGLREDVVREVRHSLGVRPVYKTVDTCAAEFAAKT
PYFYSSYDEETEVAPREKPAVIILGSGPNRIGQGIEFDYSCVHASFALSDAGYETVMVNC
NPETVSTDYDTSDRLYFEPLTLEDVLEIVHAETQAGPVAGVIVQLGGQTPLGLAQALKDN
GVPIVGTSPEAIDLAEERGAFGRVLTEAGLPAPKYGTAFSFAEAQQIATEIGYPVMVRPS
YVLGGRGMEIVYDEPSLREYLTRHAGLIDKHPVLIDRFLDDAIEIDVDALYDGHELYLGG
VMEHIEEAGIHSGDSACALPPITLGGFDIKRLRASTEAIAKGVGVRGLINIQFAMAGDIL
YVLEANPRASRTVPFTSKATAVPLAKAAARISLGATVAELRAEGMLPKTGDGGTLPLDAP
ISVKEAVMPWSRFRDIHGRGVDTILGPEMRSTGEVMGIDSVFGTAYAKSQSGAYGALPTK
GRAFVSVANRDKRSMIFPARELVAHGFELLATSGTAEVLRRNGINTTVVRKQSEGEGPDG
EKTIVQLIHDGQVDLIVNTPYGTGGRLDGYDIRTAAVARGVPCLTTVQALAAAVQGIEAM
SRGDVGVRSLQEHAEHLTAARQE
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaagcgcaccgatatccagtccgtcctggtcatcggctccggcccgatcgtcatc
ggccaggccgccgagttcgactactccggcacccaggcctgccgggtcctcaaggccgag
ggcctgcgcgtcatcctggtgaactccaacccggcgacgatcatgaccgacccggagatc
gccgacgcgacctatgtcgagccgatcaccccggacttcgtcgagaagatcatcgccaag
gagcgccccgacgcgctgctgccgaccctgggcggccagaccgcgctgaacaccgcgatc
tcgctgcacgggtccggcaccctcgacaagtacaacgtcgagctgatcggcgccaacgtc
gaggcgatcaacaagggcgaggaccgcgacctgttcaaggacgtcgtcgaggccgtcaac
cgcaagatcggccacggcgagtccgcccgctcggtcatctgccactccatggacgacgtc
ctggccggcgtcgacgagctcggcggctaccccgtcgtcgtccgcccctccttcaccatg
ggcggcgccggttccggcttcgcccacaacgaggaggagctgcgccggatcgccggccag
ggcctgacgctctcgccgaccaccgaggtgctcctggaggagtccatcctcggctggaag
gagtacgagctggagctgatgcgcgacaagaacgacaacgtcgtggtcgtctgctccatc
gagaacttcgacccgatgggcgtgcacaccggcgactcgatcaccgtcgccccggccatg
acgctcaccgaccgcgagtaccagatcctgcgggacgtcggcatcgcgatcatccgcgag
gtcggcgtcgacaccggcggctgcaacatccagttcgcggtcaaccccgacgacggccgg
gtcatcgtcatcgagatgaacccccgcgtctcgcgctcctcggcgctggcctccaaggcc
accggcttcccgatcgcgaagatcgccgcccggctcgccgtcggctacaccctcgacgag
atccccaacgacatcaccgagaagaccccggcctccttcgagccgactctcgactatgtc
gtcgtcaaggtgccgcgcttcgccttcgagaagttcccggccgccgacgccacgctgacc
acgaccatgaagtcggtcggcgaggcgatggccatcggccgtaacttccccgaggccctc
aacaaggccctgcgctccctggagaagaagggcagccagttcgacttcgtctccgagccc
ggtgacaaggccgcgctgctggagaagtcccaggtcccgaccgacggccggatcaacacg
gtcatggcggcgatccgggccggtgccaccccgcaggaggtcttcgacgccacgaagatc
gacccgtggttcgtcgaccagctcttcctcgtcaaggagatcgccgacgagatcgccgcg
gccgacaagctcgacccggagatcctcgcggacgcaaagcgccacggcttctccgacgcc
cagatcgccgcgatccgcgggctgcgcgaggacgtcgtccgtgaggtccggcactccctc
ggggtccgcccggtctacaagacggtcgacacctgcgccgccgagttcgccgcgaagacg
ccgtacttctactcgtcctacgacgaggagaccgaggtcgccccgcgcgagaagccggct
gtgatcatcctcggctccggtcccaaccgcatcggccagggcatcgagttcgactactcc
tgcgtccacgcctcgttcgcgctcagcgacgccggctacgagaccgtgatggtcaactgc
aacccggagacggtctcgacggactacgacacctccgaccgcctgtacttcgagccgctg
acgctcgaagacgtgctggagatcgtgcacgccgagacccaggccgggccggtcgccggt
gtcatcgtccagctcggcgggcagaccccgctgggcctggcgcaggcgctcaaggacaac
ggtgtgccgatcgtcggcacctcgcccgaggccatcgacctcgccgaggagcgcggcgcc
ttcggccgggtgctgaccgaggccggactgccggcccccaagtacggcaccgcgttctcc
ttcgccgaggcccagcagatcgccaccgagatcggctacccggtcatggtccgcccgtcc
tacgtgctcggcggccgcggtatggagatcgtctacgacgagccctcgctgcgggagtac
ctcacccggcacgccggcctgatcgacaagcacccggtcctcatcgaccggttcctggac
gacgccatagagatcgacgtggacgcgctctacgacggccacgagctctacctcggcggc
gtcatggagcacatcgaggaagccggtatccactccggcgactccgcctgtgcgctgccc
ccgatcaccctcggcggcttcgacatcaagcggctgcgcgcctcgacggaggccatcgcc
aagggcgtcggcgtccgcggactgatcaacatccagttcgcgatggccggggacatcctc
tacgtcctggaggccaacccccgcgcctcccgtacggtccccttcacctcgaaggccacc
gccgtaccgctcgccaaggccgccgcccggatctcgctgggcgccaccgtcgccgagctg
cgcgccgaaggcatgctgcccaagacgggcgacggcggcaccctgccgctggacgcgccg
atctccgtcaaggaagccgtgatgccctggtcgcggttccgcgacatccacggccgcggg
gtggacaccatcctcggcccggagatgcgctccaccggcgaggtcatgggcatcgactcg
gtcttcggcaccgcgtacgccaagtcgcagtccggtgcctacggggcgctgcccaccaag
ggccgcgcgttcgtctcggtcgccaaccgggacaagcgctcgatgatcttcccggcccgt
gagctggtcgcccacggcttcgagctgctcgccacctccggcaccgccgaggtgctgcgc
cgcaacggcatcaacaccaccgtggtgcgcaagcagtccgagggcgagggcccggacggt
gagaagaccatcgtccagctgatccacgacggccaggtcgacctgatcgtcaacacgccc
tacggcaccggtggccggctggacggctacgacatccgtaccgccgccgtcgcccgcggc
gtcccctgcctgaccacggtccaggcgctggccgccgccgtacagggcatcgaggccatg
tcccgcggagacgtgggcgtgcgttccctccaggaacacgccgaacatctcaccgcggcc
cgccaggagtag
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