Streptomyces sp. RPA4-5: HEP86_09175
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Entry
HEP86_09175 CDS
T10325
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
srpa Streptomyces sp. RPA4-5
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
srpa03051
]
HEP86_09175 (pafA)
Enzymes [BR:
srpa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
HEP86_09175 (pafA)
Proteasome [BR:
srpa03051
]
Prokaryotic proteasome
Bacterial regulatory particles
HEP86_09175 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
QIY54659
LinkDB
All DBs
Position
complement(2014473..2015834)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMMLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGQRKVRLASGREASALEVQQEYYEKAVDFCDRRGIRTGLV
ERVLELWGRTLEAIRDEELDRVSTEIDWVMKHQLIERYRTKNNITMSHPRVAQIDLAYHD
IHRRRGLYYLLERKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtcgcctgacgaagtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtcttcctgcggaacggcgcccgcctgtacttggacgtgggttcg
cacccggaatacgcaactcccgagtgcgacaacgtgaccgagctggtcacccacgacaag
gccggtgagcgcattctcgaaggcctgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctatctcttcaagaacaacaccgattcggcgggaaactcctac
ggctgccacgagaattatctcgtcgcccgccatggcgagttctcccggctcgcggacatc
ctcattccgttccttgtcacccgtcagctgctgtgcggcgcgggcaaggtgctccagacc
ccgcgtggcgccgtctactgcgtcagccagcgtgcggagcacatctgggagggcgtctcc
tcggcgaccacccgttcccggccgatcatcaatacccgcgatgaaccgcatgcggacgcc
gagcgctatcgccggctccatgtcatcgtcggtgactccaacatgtccgagacgaccatg
atgctgaaggtcggcgccaccgacctcgtgctgcgcatgatcgaggcgggcacggtcatg
cgcgatctgacgctggagaacccgatccgggccatccgtgaggtcagccatgacatcacc
ggccagcgcaaggtgcggctggccagcgggcgcgaggcatccgcgctcgaggtgcagcag
gagtactacgaaaaggccgtggatttctgtgaccgccgcggaatccgtaccggcctcgtc
gagcgggtcctggagctgtggggccgcaccctcgaagcgatccgggacgaggagctcgac
cgggtctcgaccgagatcgactgggtgatgaaacatcagctcatcgagcggtaccggaca
aagaacaacatcaccatgtcgcacccgcgagtggcgcagatagacctcgcgtatcacgac
atccaccgtcgccgggggctctattacctcctggagcggaaggggcaagcggcacggatc
tgcaatgacttgaagatcttcgagggcaagtcggtgccgccgcagaccacccgtgccagg
ctgcgcggcgacttcattcgccgggcgcaggagcagcgccgcgatttcacggtcgactgg
gtgcacctcaagctcaatgaccaggcgcagcgcacggtgctgtgcaaggacccgttccgc
tccgtggacgaccgggtggagaagctgatcgcgggaatgtga
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