Streptomyces sp. RPA4-5: HEP86_10430
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Entry
HEP86_10430 CDS
T10325
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa03030
DNA replication
srpa03430
Mismatch repair
srpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEP86_10430
03430 Mismatch repair
HEP86_10430
03440 Homologous recombination
HEP86_10430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srpa03032
]
HEP86_10430
03400 DNA repair and recombination proteins [BR:
srpa03400
]
HEP86_10430
Enzymes [BR:
srpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEP86_10430
DNA replication proteins [BR:
srpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEP86_10430
DNA repair and recombination proteins [BR:
srpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEP86_10430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QIY59681
LinkDB
All DBs
Position
2299195..2300178
Genome browser
AA seq
327 aa
AA seq
DB search
MGQQPGPQTPPAPWPAAYPQGYAVVDVETTGLARDDRIISAAVYQLDARGDVQDHWYTLV
NPQRDPGPVWIHGLTSAVLADAPLFPEIVPELSRRLEDRVLVAHNAMFDWSMIAREYARA
AATAPVQQRLCTIALSKELRLPLPNHKLESLAAHYGVVQERAHHALDDARVLAEAFRPSL
RRAAQENVRLPLLSCQPLTEWSDAPAPRQHAAASSYRPTSWRPSRKRPACPYPNPGRYES
GGRLIQGMRVAFSGDTSVDRELLEDRAIEAGLHVATSVSRLTSLLVTNDPDARTSKTAKA
ASFGTVVIDEAAFMQLLQDVAPAPASG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
attgggcagcagccgggcccgcagacgccgccggctccctggcccgccgcgtatccgcag
ggatacgcggtggtcgacgtcgagaccacgggcctggcccgcgacgaccggatcatctcg
gcagccgtgtatcaactcgacgcccggggcgacgtccaggaccactggtacaccctcgtc
aacccgcagcgggaccccgggccggtctggatccacgggctcacgagcgccgtgctcgcc
gatgccccgctcttcccggagatcgtcccggagctgtcccggcgcctggaggaccgggtg
ctggtcgcgcacaacgccatgttcgactggtcgatgatcgcccgcgagtacgcccgcgcc
gcggcgaccgcccccgtgcagcagcggctgtgcaccatcgccctgtccaaggaactgcgg
ctgccgctgcccaaccacaagctggagtccctcgccgcccattacggcgtggtgcaggag
cgcgcccaccatgcgctcgatgacgcccgggtgctggccgaggcgttccgcccgagtctg
cggcgcgccgcgcaggagaatgtgcggctgccgctgctcagctgccagccgctgacggag
tggtcggacgcccccgcgccccggcagcatgccgccgcctcgtcctaccgccccacgtcc
tggcggccgtcccgtaagcgcccggcgtgcccgtaccccaacccggggcgctacgagtcc
ggcggccggctgatccaggggatgcgggtggccttctcgggtgacacgtcggtggaccgt
gagctgctggaggaccgggcgatcgaggcgggcctgcatgtcgccacgagcgtgtcccgg
ctgaccagcctgctggtgaccaacgaccccgacgcccggacctcgaagaccgccaaggcc
gcctcgttcggcacggtcgtcatcgacgaggcggccttcatgcagctgctccaggacgtg
gccccggcgcctgcgtccgggtga
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