Streptomyces sp. RPA4-5: HEP86_14480
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Entry
HEP86_14480 CDS
T10325
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa00550
Peptidoglycan biosynthesis
srpa01100
Metabolic pathways
srpa01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HEP86_14480 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HEP86_14480 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srpa01011
]
HEP86_14480 (mrdA)
Enzymes [BR:
srpa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HEP86_14480 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
srpa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HEP86_14480 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QIY55524
UniProt:
A0A6H1JY42
LinkDB
All DBs
Position
complement(3192534..3194684)
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AA seq
716 aa
AA seq
DB search
MSNLPETRTSRVGVRLIAIQILVFSLLLTLGGRLWYLQIRNGTEYATEARNNHVQQVIEP
ATRGSILDARGVPLADNQTRLVVSASRTELLKMKDDGKGVLGRLAKVLGMSGKEIRNKVR
LCDSKTPQPCWNGSPYQPIPITDEATTQQALQIRERSEDFPGISAEPTAVRRYAAPGDAN
TAQVLGYLSPVTDGEIKKAEHSRSPLLRSDQIGRSGLERTYDDALRGKAAVTRYEVDNLG
RVIGQAKSEKGKAGASVVTSIDARVQGLAEKQLDQAMKDARKEHDKNTGTNYKADSGAVV
VMEAKTGRVVAMASNPTYDPNAWVGGISGKDYAHLTGKDSNYPLLNRAIQGQAAPGSIFK
VISTAAAVNAGYDFNGHYPCTSSYSIGGQTFKNFESQSHGAISLGRALEVSCDTVFYRLS
HDEWRKDGGDKPKKDAKNWFYKTAHQFGLGKETGIDLPNEVTGRVPDRKWKNAFWKANKA
GWCEQAKAWPKKKDFGTKLAREGCLEGMKLHAYDSINYAIGQGDTLVTPMQMATIYGAIS
NGGTLYNPTVGKAVISPDGKHIQRVKPRSHGRLPVTQKTLHQMDGALAGVATRGTAAWRF
GGWPQDKIPMHAKTGTAEVYGKQTTSWFATYTKDYTIVMTIAQGGTGSGASGPAVRNIYN
ALYGVDEKGGIDPKAALLPRPEAKLPKIESDGAIQSQPIKPYAPPSPSPSASESPR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatctcccggaaacccggacctcccgggtcggcgtccggctcatcgcgatccag
atcctggtcttctcgctgttgctcacgctcggcggccggctctggtatctacagatccgc
aatggcacggagtacgccaccgaggccaggaacaaccacgtccagcaggtcatcgagccc
gccacccgcggctccatcctcgacgcgcgcggagtgccgctggccgacaaccagacccgt
ctggtggtgtcggccagccgtaccgagctgctgaagatgaaggacgacggcaagggcgtg
ctcggccggctggccaaggtgctcggcatgtccgggaaggagatccgcaacaaggtccgc
ctctgcgactccaagacgccgcagccgtgctggaacggctcgccgtaccagccgatcccg
atcaccgacgaggccaccacccagcaggccctccagatccgcgagcgctccgaggacttc
cccggcatcagcgccgagccgaccgccgtccgccgctacgccgccccgggcgacgccaac
accgcccaggtcctcggctatctctcgccggtcaccgacggggagatcaagaaggccgag
cacagccggtccccgctgctgcgctcggaccagatcggccggtccggtctggagcggacg
tacgacgacgcgctgcgtggcaaggccgccgtcacccgctacgaggtcgacaacctcggc
cgggtcatcggccaggcgaagagcgagaagggcaaggccggcgccagcgtcgtcaccagc
atcgacgcccgggtgcagggcctggcggagaagcagctggaccaggccatgaaggacgcc
cgtaaggagcacgacaagaacacgggcaccaactacaaggccgactcgggcgccgtcgtc
gtcatggaggcgaagaccggccgggtggtggcgatggcctccaaccccacctacgacccg
aacgcctgggtcggcgggatctcgggcaaggactacgcccacctcaccggcaaggactcc
aactacccgctgctgaaccgcgccatccaggggcaggccgcccccggctcgatcttcaag
gtcatctcgaccgcggccgcggtcaacgcgggctatgacttcaacggtcactacccctgc
accagctcgtacagcatcggcggccagaccttcaagaacttcgagtcgcagagccatggc
gcgatcagcctcggccgggcgctggaggtctcctgcgacaccgtcttctaccgcctctcg
cacgacgagtggcggaaggacggcggggacaagccgaagaaggacgccaagaactggttc
tacaagacggcccaccagttcgggctcggcaaggagaccggtatcgacctcccgaacgag
gtcaccggccgggtccccgaccgcaagtggaagaacgccttctggaaggccaacaaggcg
ggctggtgcgaacaggccaaggcctggccgaagaagaaggacttcggcaccaagctcgcc
cgggaaggctgcctggagggcatgaagctgcacgcctacgactcgatcaactacgccatc
gggcagggcgacaccctcgtcaccccgatgcagatggcgacgatctacggcgcgatcagc
aacggcggcacgctctacaaccccaccgtcggcaaggccgtcatcagccccgacggcaag
cacatccagcgggtcaagccccggtcgcacggccggctgccggtgacgcagaagacgctc
caccagatggacggcgccctcgccggtgtcgccacccgtggtaccgccgcctggcggttc
ggcggctggccgcaggacaagatcccgatgcacgccaagaccggtacggccgaggtctac
ggcaagcagacgacctcgtggttcgcgacgtacaccaaggactacacgatcgtcatgacg
atcgcccagggtggtaccggctccggcgcctccggtcccgccgtgcgcaacatctacaac
gcgctgtacggagtcgacgagaagggcggcatcgaccccaaggccgcgctgctcccgcgg
ccggaggccaagctgcccaagatcgaaagtgatggcgccatccagtcccagcccatcaag
ccgtatgccccgccgtcgccgtcgccgtccgcatcggagagcccacgatga
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