Streptomyces sp. RPA4-5: HEP86_21760
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Entry
HEP86_21760 CDS
T10325
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srpa Streptomyces sp. RPA4-5
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srpa03021
]
HEP86_21760
Transcription machinery [BR:
srpa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP86_21760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
HTH_3
NirdL-like_HTH
HTH_24
DUF7343
DUF134
HTH_5
MarR
NMB0315_dom_I
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QIY56675
LinkDB
All DBs
Position
complement(4862233..4863042)
Genome browser
AA seq
269 aa
AA seq
DB search
MTVTARTAPKAPSRESRSADTRALTQVLFAELTDLDPGTPEHTRVRAALIEANLPLVRYA
AARFRSRNEPMEDVIQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTV
HVPRRLHELWVQVNGATEDLTVLHGRSPTTAEIAERLKIGEDEVLACLEAGRSYHATSLE
AAQEGDGLPGLLDRLGYEDPELAGVEHRDLVRHLLVQLPEREQRILLLRYYSNLTQSQIS
AELGVSQMHVSRLLSRSFARLRSANRIDA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgacggcccgtactgcgcccaaggctccatcccgcgagagccgaagcgcggac
acgcgggcgctcacgcaggtgctgttcgcggagctgacggacctcgaccccggcaccccg
gagcacacccgggtccgcgccgccctgatcgaggccaatctgccgctggtccgctatgcc
gcggcgcgcttccgcagccgcaatgagccgatggaggacgtcatccaggtcggcaccatc
ggcctgatcaacgcgatcgaccggttcgatccggaccgcggcgtccagttccccaccttc
gcgatgcctaccgtcgtcggcgagatcaaacgctactttcgagacaatgtccgcacggtc
catgtgccacgccgtctccacgagctctgggtccaggtcaacggcgcgaccgaggacctg
acggtgctgcacggccgctcccccaccaccgccgagatcgccgagcgactgaagatcggc
gaggacgaggtactggcctgcctggaggcgggccgttcgtatcacgccacctcactggag
gccgcacaggagggcgacggcctgcccggtctgctcgaccgcctcggatacgaggacccg
gagctggccggcgtcgagcaccgggacctcgtacggcatctcctggtccagctgccggag
cgcgagcagcggatccttctgctgcgttactacagcaatctgacgcagtcacagatcagt
gcggaactaggggtgtcgcagatgcatgtctcgcggctactgtcgcggagcttcgctcgg
ctgcgatccgcaaacaggatcgacgcgtag
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