Streptomyces sp. RPA4-5: HEP86_23900
Help
Entry
HEP86_23900 CDS
T10325
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa00190
Oxidative phosphorylation
srpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
HEP86_23900
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEP86_23900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srpa03019
]
HEP86_23900
Enzymes [BR:
srpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
HEP86_23900
Messenger RNA biogenesis [BR:
srpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HEP86_23900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
AcetylCoA_hyd_C
Motif
Other DBs
NCBI-ProteinID:
QIY57013
UniProt:
A0A6H1JYK5
LinkDB
All DBs
Position
5338147..5340429
Genome browser
AA seq
760 aa
AA seq
DB search
MNQQPSAQAQIQPEMSTTKPSQAPGPSAQPSVGSIAAHRPNAVRGTVPGLEPDLDADPDA
YEDEGVVGADGEELPSGRFLDRERSWLAFNERVLELAEDPATPLLERANFLAIFASNLDE
FFMVRVAGLKRRIATGVATRSASGLQPREVLDLIWTRSRELMARHAACFQQDIAPELADQ
GIHLIRWPELTEKEQARLFTLFRQQIFPVLTPLAVDPAHPFPYISGLSLNLAVVVRNPVS
GHDHFARVKVPPLLSRFLEASPQRYVPIEDVIAAHLEELFPGMEVRAHHMFRVTRNEDLE
VEEDDAENLLQALEKELMRRRFGPPVRLEVEESIDPAVLDLLVQELKISDAEVYPLPGPL
DLTGLFGIGALDRPELKYPKFVAGTHRDLAEVESASAPDIFAALRARDVLLHHPYDSFST
SVQAFLEQAAGDPDVLAIKQTLYRTSGDSPIVDALIDAAESGKQVLVLVEIKARFDEQAN
IKWARKLEESGCHVVYGLVGLKTHCKLSLVVRQEGEMLRRYSHVGTGNYHPKTARLYEDL
GLLTADPQVGADLSDLFNRLSGYSRRETYRRLLVAPKSLRDGLIQRINKEIENQRAGRDA
YVRIKVNSMVDEAVIDALYRASQAGVPVDIWVRGICALRPGVTGLSETIRVRSILGRFLE
HSRIFVFGNGGEPEVWLGSADMMHRNLDRRIEALVRVADPAHRASLNRLLERGTSDATSS
WHLGPDGDWTRHAVDADGAPLRNVQEMLIDARRRRRGPAT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcagcccagcgctcaggcacagatccagcccgagatgtccaccacgaagccc
tcgcaggccccgggcccctcggcccagccttcggtgggctccatcgctgcgcaccgcccg
aacgcggtccggggcacggtgcccggcctggagcccgacctggacgccgatccggacgcg
tacgaggacgagggcgtggtgggcgcggacggcgaggagctgcccagcggccggttcctg
gaccgcgagcggagctggctggccttcaacgagcgggtgctggaactggccgaggacccg
gccacccccctcctcgaacgggctaatttcctggcgattttcgccagcaatctggacgag
ttcttcatggtccgggtcgcgggcctgaagcggcggatagccaccggcgtcgccacccgc
tccgcgtccgggctgcagccccgtgaggtgctggacctcatctggacgcgctcacgtgag
ctcatggcccggcacgccgcctgcttccagcaggacatcgcccccgagctggctgaccag
ggcattcatctgatccgctggcccgagctgaccgagaaggagcaggcccgcctgttcacc
ctcttccgtcagcagatcttcccggtgctcacgcccctggcggtggacccggcgcacccc
ttcccgtacatctccggcctctcgctgaatctggccgtcgtcgtacgcaacccggtcagc
ggccacgaccacttcgcgcgggtcaaggtaccgccgctgctctcccgcttcctggaggcc
tccccgcagcgctacgtccccatcgaggacgtcatcgccgcccacctggaggagctgttc
ccgggcatggaggtgcgcgcgcaccacatgttccgggtcacccgcaacgaggacctggag
gtcgaggaggacgacgcggagaacctcctccaggcgctggagaaggagctgatgcggcgg
cgcttcggaccgccggtccgcctggaggtcgaggagtccatcgacccggccgtgctcgac
ctgctcgtccaggaactgaagatctccgacgccgaggtctacccgctgcccggcccgctg
gacctgaccggcctcttcggcatcggggcgctggaccggccggagctgaagtaccccaag
ttcgtggccggcacccaccgtgacctcgccgaggtggagtcggcgtccgcgccggacatc
ttcgccgccctgcgcgcccgcgacgtcctgctgcaccacccctacgactccttctcgacc
tccgtccaggcgttcctggagcaggccgccggtgacccggacgtgctcgcgatcaagcag
acgctctaccgcacctccggtgactcgccgatcgtggacgccctgatagacgccgcggag
tccggcaagcaggtgctcgtcctcgtcgagatcaaggcccgcttcgacgagcaggccaac
atcaagtgggcgcggaagctggaggaatccggctgccatgtcgtctacgggctggtcggc
ctcaagacgcactgcaagctctcgctggtggtccgccaggaaggcgagatgctgcgccgc
tactcccatgtggggaccggcaactaccaccccaagacggcgcggctctacgaggatctc
gggctgctgaccgccgatccgcaggtcggcgcggatctctccgacctcttcaaccggctc
tccggctactcccgccgcgagacctaccgccgcctcctggtcgcccccaagtccctgcgg
gacggcctgatccagcggatcaacaaggagatcgagaaccagcgggccggccgcgacgcc
tacgtccgtatcaaggtcaactcgatggtcgacgaggccgtcatcgacgcgctctaccgc
gcctcccaggccggggtgccggtcgacatctgggtgcgcggcatctgcgcgctccggccg
ggtgtcaccggcctgagcgagaccatccgggtccgcagcatcctcggccgcttcctcgaa
cactcccggatcttcgtcttcggcaacggcggggagcccgaggtgtggctgggcagcgcc
gacatgatgcaccggaatctggaccgccggatcgaggcgctggtgcgggtcgccgacccg
gcgcaccgcgcctccctcaaccggctgctggagcgggggacgtcggatgccacctcgtcc
tggcacctgggcccggacggggactggacccggcatgcggtggacgcggacggcgcgccg
ctgcgcaacgtacaggaaatgctcattgacgcccggaggcgccggcgtggcccagcgaca
tga
DBGET
integrated database retrieval system
