Streptomyces sp. RPA4-5: HEP86_24365
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Entry
HEP86_24365 CDS
T10325
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa03420
Nucleotide excision repair
Brite
Enzymes [BR:
srpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP86_24365
Transcription machinery [BR:
srpa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HEP86_24365
DNA repair and recombination proteins [BR:
srpa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HEP86_24365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QIY57084
UniProt:
A0A6H1K2M3
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All DBs
Position
complement(5432422..5434074)
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AA seq
550 aa
AA seq
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MNGPLIVQSDKTLLLEVDHELADACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVQFSRYPVPHALLVDIAETMSRYGRLTLVKDPAHGLMLTTTDRPVLEEILR
SKKVQPLVGARLDPDSVVVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELDENGWA
LRPYQQQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEEEIGEYSGARKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTESERLAYATAETEEKYRFCATTASKQYVTEALVRRHQGEQTLVIGQYIDQ
LDELGEHLDAPVIKGETTNAQREKLFDAFRQGEISVLVVSKVANFSVDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DELLAADEDV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggacccctcatcgtccagagcgacaagacgctgctgctggaggtggaccatgag
ctggcggacgcctgccggcgggccatcgcgcccttcgccgagctggagcgggcgcccgag
cacatccatacgtaccgggtgacgccgctgggactgtggaacgcgcgggccgccgggcac
gacgccgagcaggtcgtggacgcgctggtgcagttctcgcggtatccggtgccgcacgca
ctgctcgtcgacatcgccgagacgatgtcccgctacgggcggctgacgctggtcaaggac
cccgcgcacggtctgatgctgaccaccaccgaccgcccggtgctggaggagatcctgcgg
tcgaagaaggtgcagccgctggtcggggcgcggctggacccggactcggtcgtggtgcac
ccgtcggagcgcgggcagatcaagcagacgctgctcaagctgggctggccggccgaggac
ctggccggttacgtcgacggtgaggcgcacccgatcgagctggacgagaacggctgggcg
ctgcggccgtaccagcagcaggccgtggagggtttctggcacggcggctcgggtgtggtc
gtgctgccctgcggtgcgggcaagacgctggtcggggcgggcgcgatggcgcaggccaag
gcgaccacgctgatcctggtgacgaacacggtctcggcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggaggagatcggcgagtacagcggcgcgcgcaaggag
atccggccggtcaccatcgccacgtaccaggtgctgacgaccaagcggaagggcgtctac
ccgcatctggagctcttcgactcccgggactggggcctgatcgtctacgacgaggtgcat
ctgctgcccgccccggtcttcaagttcaccgccgatcttcaggcccggcggcggctgggg
ctgaccgcgacgctggtccgcgaggacggccgggagtcggatgtcttctccctcatcggg
cccaagcggttcgacgccccgtggaaggagatcgaggcccagggctatatcgcccccgcg
gactgtgtcgaggtccgggtcaatctgaccgagtcggagcggctggcgtatgccacggcc
gagaccgaggagaagtaccgcttctgcgccaccacggccagcaagcagtacgtgaccgag
gcgctggtccgccggcaccagggcgagcagacgctggtcatcggccagtacatcgaccag
ctggacgagctgggcgagcatctggacgcaccggtgatcaagggcgagaccaccaacgcc
cagcgcgagaagctcttcgacgccttccgtcagggcgagatctcggtgctcgtggtctcc
aaggtcgcgaacttctccgtcgacctcccggaggcgacggtcgcgatccaggtgtccggc
accttcggctcccgccaggaggaggcccagcggctgggccgggtgctgcgccccaaggcg
gacgggcacgaggcgcggttctactcggtcgtcgcgcgcgacaccatcgaccaggacttc
gcggcccaccgccagcgcttcctggccgagcaggggtacgcgtaccggatcgtggacgcg
gacgagctgctggcggccgacgaggacgtctga
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