Streptomyces sp. RPA4-5: HEP86_24900
Help
Entry
HEP86_24900 CDS
T10325
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa03420
Nucleotide excision repair
srpa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HEP86_24900 (pcrA)
03430 Mismatch repair
HEP86_24900 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srpa03400
]
HEP86_24900 (pcrA)
Enzymes [BR:
srpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP86_24900 (pcrA)
DNA repair and recombination proteins [BR:
srpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEP86_24900 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HEP86_24900 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Terminase_6N
DEAD
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QIY57170
LinkDB
All DBs
Position
5556908..5559385
Genome browser
AA seq
825 aa
AA seq
DB search
MSSLFDDSFLADLGHKGEEEHPPPPEDEHGPAPEEIPADLFGGRFDAPAPREPYYRDGAA
RPAIDPAALLEGLNDEQKAAVVHTGGPLLIVAGAGSGKTRVLTHRIAHLLAERHVHPGQI
LAITFTNKAAGEMKERVEELVGPRANAMWVSTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRYPPKSFSAKISNLKNELIDEETFAGTAADGFEKTLAEAYAM
YQARLREANALDFDDIIMTTVNLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVREL
VGPAETAAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQNYRSSQTILSAA
NAVIERNENRRPKNLWTDAGAGPKITGYVADTEHDEAQFVADEIDRLTDAKDAKAGDVAV
FYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLSNPEDTVPLRRILN
VPKRGIGDRAEAMIDALSGREKITFPQALRRVDEAYGMAARSANAVKRFNVLMEELRTIV
ESGAGPATILEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQDRGEAAAEGA
AAPGPGTLSDFLEQVALVADSDQIPDEDEEGSGVITLMTLHTAKGLEFPTVFLTGMEDGV
FPHMRSLGQTKELEEERRLAYVGITRARERLYVTRSTMRSAWGQPSYNPPSRFLEEIPVD
YVEWKRTGPATPSASMGGLSAGGGGGFGSSFSSSRAKGPSGFATRRSQDRPAASLAIGDR
VTHDSFGLGTVVGVKGSGDNAEATIDFGGEKPKRLLLRYAPVEKL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctcggccacaagggcgaggaggag
caccccccgccccccgaggacgagcacggcccggccccggaggagatccccgccgacctc
ttcggcgggaggttcgacgcgcccgcgcccagggagccgtactaccgcgacggcgccgcc
cgccccgccatcgacccggcggcgctgctggaggggctcaacgacgagcagaaggccgcc
gtggtgcacacgggcggtccgctgctgatcgtcgccggtgccggctccggcaagacccgg
gtgctgacccaccgcatcgcgcatctgctcgccgagcgccatgtacaccccggccagatc
ctcgcgatcacgttcaccaacaaggccgccggtgagatgaaggagcgcgtcgaggagctg
gtcggcccgcgcgccaacgccatgtgggtctccaccttccacagtgcctgtgtccgcatc
ctgcgccgcgagtccaagaagctgggcttcacctcgtccttctcgatctacgacgccgcc
gactccaagcgcctgatggccctggtctgccgcgatctggatctggaccccaagcgctac
ccgcccaagtccttcagcgcgaagatctccaacctcaagaacgagctcatcgacgaggag
accttcgccgggaccgcggccgacgggttcgagaagacgctggccgaggcgtatgcgatg
taccaggcacggctgcgcgaggccaacgccctggacttcgacgacatcatcatgaccacg
gtcaatctgctccaggcattcccggacgtcgccgagcactaccgccgccgcttccgccat
gtcctcgtcgacgagtaccaggacaccaaccacgcccagtacaccctcgtacgcgaactg
gtcggccccgcggaaaccgccgccgagctgtgcgtcgtcggtgacgccgaccagtcgatc
tacgccttccgcggcgccacgatccgcaacatcctccagttcgaggaggactacccggac
gcgaccacgatcctgctggagcagaactaccgctcctcgcagacgatcctgtccgccgcc
aacgccgtcatcgagcgcaacgagaaccgccgccccaagaacctctggacggacgccggc
gccggccccaagatcaccggctatgtcgccgacaccgagcacgacgaggcccagttcgtc
gccgacgagatcgaccggctgacggacgccaaggacgccaaggccggcgatgtcgccgtc
ttctaccgcaccaacgcccagtcccgggtcttcgaagagatcttcatcagggtcgggctg
ccctacaaggtcgtcggcggggtgcgcttctacgagcgcaaggaggtccgcgatgtgctc
gcctatctgcgggtgctcagcaaccccgaggacaccgtcccgctgcgccgcatcctgaac
gtgcccaagcgcggtatcggcgaccgcgccgaggcgatgatcgacgccctgtcggggcgc
gagaagatcaccttcccgcaggcactgcgccgggtcgacgaggcatacggcatggcggcc
cgttccgccaacgccgtcaagcgcttcaacgtcctcatggaggagctgcggaccatcgtc
gagtccggcgccggccccgccaccatcctggaagcagtcctggagcgtacgggctacctc
gccgagctccaggcctccaccgacccccaggacgagacccggatcgagaacctccaggaa
ctcgccgccgtggccctggagttcgagcaggaccgcggcgaggccgcggcagagggggct
gccgccccgggtcccggcaccctctcggacttcctggagcaggtcgcgctggtcgccgac
tccgaccagatcccggacgaggacgaggaaggcagcggcgtcatcaccctcatgacgctg
cacaccgccaagggcctggaattcccgaccgtcttcctgaccggcatggaggacggcgtc
ttcccgcacatgcgctcgctgggccagaccaaggagctggaggaggagcgccggctggcc
tatgtcggcatcacccgcgcccgcgagcggctctacgtcacccgctcgacgatgcgcagc
gcctggggccagccctcgtacaacccgccctcccggttcctggaggagatcccggtcgac
tacgtggagtggaagcggacgggcccggcgacgccctccgcctccatgggcggcctgtcg
gcgggcggcggaggcggcttcggctcctccttctcgtcgtcgcgcgccaagggccccagc
ggcttcgcgacccgccgctcccaggaccgcccggcggcctcgctggccatcggcgaccgc
gtcacgcacgacagcttcggcctcggcacggtcgtcggcgtcaagggcagcggcgacaac
gccgaggcgacgatcgacttcggcggcgagaagcccaagcggctgctgctgcggtatgcg
ccggtggagaagctgtaa
DBGET
integrated database retrieval system
