Streptomyces sp. RPA4-5: HEP86_26775
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Entry
HEP86_26775 CDS
T10325
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa03420
Nucleotide excision repair
srpa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HEP86_26775
03430 Mismatch repair
HEP86_26775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srpa03400
]
HEP86_26775
Enzymes [BR:
srpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP86_26775
DNA repair and recombination proteins [BR:
srpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEP86_26775
MMR (mismatch excision repair)
Other MMR factors
HEP86_26775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
DUF6011
Zn_Ribbon_TF
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QIY57465
UniProt:
A0A6H1K6Q9
LinkDB
All DBs
Position
5970210..5972438
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AA seq
742 aa
AA seq
DB search
MTAATDSSLFPQVPDSADGVLDGLDPEQREVATALHGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPASVLAVTFTARAAGEMRGRLRQLGAGGVQARTFHSAALRQLQFFWPKAVGGD
VPRLLERKIQLVAEAAARCRIRLDRNELRDVTAEIEWSKVTQTVPADYPAAVAKAGREAP
RDPAEVGQIYGTYEQLKRDRGTIDFEDVLLLTVGVLQDRHDIAEQVRTQYQHFVVDEYQD
VSPLQQRLLELWMGDRDNLCVVGDASQTIYSFTGATPDHLLNFRTRHPNATVVKLVRDYR
SSPQVVHLANGLLSQARGRAAEHRLELISQRDAGPEPVYTEYADEPAEAEGTARRIRDLI
ASGVSAGQIAVLFRINAQSEVYEQALADAGVPYQLRGAERFFERPEVREAGVKLRGAARF
GGNDALLDDALDLPSEVRAVLSDMGWTSRPPAGSGAVRDRWESLAALVRLAEDFARARPT
ATLADLVAELDERANAQHAPTVEGVTLASLHAAKGLEWEAVFLVGLTEGMMPITYAKTDE
QIEEERRLLYVGVTRARVHLGLSWSLARSPGGRASRRPSRFLSGLRPGSGAVAGRRTPGA
VSGGVERGDGAAPVARRTKHRSPARCRVCNRTLTDPGEMKLMRCEDCPSELDEALYERLS
DWRAEQAARSRQPAYCIFTDKTLMAIAEAVPGTESELAVISGVGRRKFDRYGSEVLAICA
GEELAGVSEEGPEGAAENSSKK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacggactcctctcttttcccgcaggtgcctgactcggccgacggggtg
ctcgacgggctcgaccccgagcagcgcgaggtcgcgacggctctgcacggtccggtgtgt
gtgctggccggtgccggcacgggcaagacccgcgcgatcacccaccggatcgcgtacggg
gtgcgggccggaattctccagcccgcgagtgtgctcgccgtcacgttcacggcccgcgcg
gccggcgagatgcgcggccggctgcgtcagctcggtgcgggcggggtccaggccaggacg
ttccactccgcggcgctgcggcagctccagttcttctggccgaaagccgtcggcggggac
gtcccgcggctgctggagcgcaagatccagctcgtcgccgaggccgccgcccgctgccgc
atccggctcgaccgcaatgagctgcgcgatgtcacggcggagatcgagtggtccaaggtc
acccagaccgtcccggccgactatccggcggcggtcgccaaggccggccgggaggccccg
cgcgatccggccgaggtcgggcagatctacggcacgtacgaacagctcaagcgcgaccgg
ggcaccatcgacttcgaggacgtgctgctgctcacggtcggcgtcctacaggaccggcac
gacatcgccgagcaggtccgtacgcagtatcagcacttcgtcgtcgatgagtaccaggac
gtcagcccgctccagcagcggctgctggagctgtggatgggggaccgcgacaacctctgc
gtggtcggcgacgccagccagacgatctacagcttcaccggcgccacccccgaccacctc
ctcaacttccgcacccgccacccgaacgccacggtcgtcaagctcgtccgcgactaccgc
tccagcccccaggtcgtgcacctcgccaacggcctgctctcccaggcccgggggcgggcc
gccgagcaccgcctggagctgatctcgcagcgggacgcgggccccgagcccgtctacacg
gagtacgccgacgagcccgccgaggccgagggcaccgcccgccggatccgtgacctgatc
gcctccggggtgtcggcggggcagatcgccgtcctcttccgtatcaacgcgcagtccgag
gtctatgagcaggctctggccgatgccggggtgccgtatcagctgcggggcgccgagcgg
ttcttcgaacggccggaggtgcgcgaggcgggcgtcaagctgcggggcgccgcccgcttc
gggggcaacgacgcgctgctcgacgacgcgctggacctgccgtccgaggtgcgggcggtg
ctcagcgacatgggctggaccagccggcccccggcgggttccggggcggtgcgggaccgc
tgggagtccctggccgctctggtgcgactcgccgaggacttcgcccgggcccggcccacg
gccaccctcgccgacctcgtcgccgagctggacgagcgggccaacgcgcagcacgccccg
acggtcgaaggcgtgaccctcgcgtccctgcacgccgccaagggcctggagtgggaagcc
gtcttcctggtcggtctcaccgaaggcatgatgccgatcacctacgccaagaccgacgag
cagatagaggaggagcgccggctcctgtatgtcggcgtcacccgcgcccgcgtccatctg
gggctgtcctggtcgctggcgcgctctccgggcgggcgggcctcccgccgccccagccgg
ttcctgagcggcctgcggccgggctccggggcggtggcgggccgccgcacaccgggcgcg
gtctcagggggcgtcgagcgcggcgacggggcggcgccggtggctcggcgcaccaagcac
cgcagtccggcccgctgccgggtctgcaaccggacgctcacggacccgggcgagatgaag
ctgatgcggtgtgaggactgcccttcggagctggacgaggcgctctacgagcgactgtcc
gactggcgggccgagcaggccgcacgctcccggcagcccgcgtactgcatcttcaccgac
aagacactgatggcgatcgcggaggccgttccgggaaccgaatcggagcttgcggtcatc
tcaggagtggggcggcggaagttcgaccgctacggcagtgaggtgctggcgatctgtgcc
ggcgaggagctcgcgggggtctctgaggaggggcccgaaggcgccgcggaaaactcgtcg
aaaaaatag
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