Streptomyces sp. RPA4-5: HEP86_29265
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Entry
HEP86_29265 CDS
T10325
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
srpa Streptomyces sp. RPA4-5
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srpa03016
]
HEP86_29265 (truB)
Enzymes [BR:
srpa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HEP86_29265 (truB)
Transfer RNA biogenesis [BR:
srpa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HEP86_29265 (truB)
Prokaryotic type
HEP86_29265 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QIY57866
LinkDB
All DBs
Position
6526846..6527775
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AA seq
309 aa
AA seq
DB search
MKRESNKPGGLVIVDKPSGFTSHDVVAKMRGMARTRRVGHAGTLDPMATGVLVLGLERAT
KLLGHLALTEKEYVGTIRLGQTTVTDDAEGEITESKPAHGLAREDIDAGVAELSGAIMQV
PSKVSAIKINGKRSYSRVRDGEDVEIPARPVTVSSFVVHSAHEGEAEDGTPVTDLLVSVE
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYKLDRARTLDQLQAAVDDTEGEGLPV
MPLGDAAAAAFTRWDVAEPQVRLLLNGARIPMPRFEGDGPVAAFGPDGMFLALVENQGGK
AKSLAVFAL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgagagcaacaagccgggcggtctggtcatcgtcgacaagccgtccggcttc
acttcgcacgacgtggtggcgaagatgcgtgggatggcgcgtacccgcagggtcgggcac
gccggcacgctcgacccgatggccaccggcgtcctcgtcctgggcctggagcgggccacc
aagctgctgggccatctcgcgctgacggagaaggagtacgtcggcacgatccggctcggc
cagacgaccgtcaccgatgacgccgagggcgagatcaccgagtcgaagccggcgcacggc
ctcgcccgcgaggacatcgacgcgggtgtcgccgagctgtccggtgcgatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcaacggcaagcgttcgtactcgcgggtccgcgac
ggcgaggacgtggagatcccggcccgcccggtgaccgtctcctcgttcgtggtgcactcc
gcgcacgagggcgaggccgaggacggcaccccggtgaccgacctgctggtctccgtcgag
tgctcgtccggtacgtacatccgggcgctggcccgtgatctgggggccgggctcggcgtc
ggcggccatctgaccgcgctgcgccgcacccgcgtcggcccgtacaagctggaccgggcg
cgcacgctcgaccagctccaggcggcggtggacgacaccgagggcgagggcctgccggtc
atgccgctcggcgacgcggccgccgcggcgttcacccgctgggatgtcgccgaaccgcag
gtgcggctgctgctcaacggcgcgcggatcccgatgccgcgcttcgagggcgacggcccg
gtcgcggccttcgggccggacggcatgttcctggcactggtggagaaccagggcgggaag
gccaagagcctggcggtgttcgccctctag
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