Streptomyces sp. RPA4-5: HEP86_29925
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Entry
HEP86_29925 CDS
T10325
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
srpa Streptomyces sp. RPA4-5
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srpa03032
]
HEP86_29925
03400 DNA repair and recombination proteins [BR:
srpa03400
]
HEP86_29925
Enzymes [BR:
srpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HEP86_29925
DNA replication proteins [BR:
srpa03032
]
Prokaryotic type
DNA Topoisomerases
HEP86_29925
DNA repair and recombination proteins [BR:
srpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HEP86_29925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SelB_WH2
Motif
Other DBs
NCBI-ProteinID:
QIY57978
LinkDB
All DBs
Position
complement(6694631..6697078)
Genome browser
AA seq
815 aa
AA seq
DB search
MARRSTKTPPPDDFEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRILY
QMNEMGLRPDRGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRLPLVDGHGNFG
SLGNDDPPAAMRYTECRMASATSLMTESIDEDTVDFSPNYDGQEQEPAALPAAYPNLLVN
GASGIAVGMATNMPPHNLGEVIAAARHLIKHPNADLDTLMRFVPGPDLPTGGRIVGLGGV
RDAYEKGRGTFKIRATVTVESVTARRKGLVVTELPFTVGPEKVISKIKDLVGSKKLQGIA
DVKDLTDREHGLRLVIEVKNGFNPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLKE
LLEVYVDHRFNVVRRRSEFRRTKRRDRLHLVEGLLTALVDIDEVIRLIRSSENSAQAKER
LIERFSLSDIQTQYILDTPLRRLTKFDRIELESERDRLQDEIEKLTVILESDTELRKLVS
NELAAVAKKYGTDRRTVLLESAGPAVGAVPLEVSDDPCRVLLSSTGLLARTVTGDMAFDI
DAKRAKHDVIVSAVPATTRGEVGAVTSLGRLLRISVIDLPQLPETAAAPSLSGGAQLSEF
LTLEDGEELICLTTLDESSPGLALGTEQGVVKRMVPDYPANKDELEVITLREGDRIVGAV
ELRTGDEDLVFITNEAQLLRYPASQVRPQGRPAGGMTGIKLGEGAKVISFAAVDPATDAM
VFTVAGSHGTLDDSEATAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLTQAWAVPAPVRA
ADAKGSPVELPEVDPRRDGSGVPLPKPVAALAGPV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagaccccgccgccggacgacttcgaggagaggatcctcgac
atcgacgtcgtcgacgagatgcagggttccttccttgagtacgcgtattcggtcatctac
tcgcgcgccttgccggacgcccgcgacggtctcaagcccgtgcaccgccgcattctgtac
cagatgaacgaaatggggctgcgccccgaccgcggctacgtcaagtgcgcccgcgtcgtc
ggcgaggtgatgggtaagctccacccgcacggcgacgcatcgatctacgacgcgctggtg
cgcatggcgcagccgttctccatgcggctgccgctggtggacggtcacggcaacttcggt
tccctgggcaatgacgacccgcccgccgcgatgcggtacaccgagtgccggatggcctcc
gccacgtccctgatgacggagtccatcgacgaggacaccgtcgacttctcgccgaactac
gacggccaggagcaggaaccggccgccctccccgccgcgtacccgaacctcctggtcaac
ggcgcctccggcatcgccgtcggtatggcgacgaacatgccgccgcacaacctcggcgag
gtcatcgccgccgcccgccatctgatcaagcaccccaacgccgatctcgacaccctgatg
cgcttcgtgccgggtcccgatctgcccacgggcggccggatcgtgggcctcggcggcgta
cgggacgcgtacgagaagggccgtggcacgttcaagatccgtgcgacggtcaccgtggag
agcgtcaccgcccgccgcaagggcctggtcgtcaccgaactccccttcaccgtcggcccc
gagaaggtcatctccaagatcaaggacctggtcgggtcgaagaagctccagggcatcgcc
gacgtcaaggacctcaccgaccgcgaacacggcctgcggctggtgatcgaggtcaagaac
ggcttcaaccccgaggccgtattggagcagctctacaagctcacgccgatggaggagtcc
ttcggcatcaacaacgtcgcgctggtggacggccagccgctgacgctgggcctcaaggaa
ttgctggaggtctatgtcgaccaccgcttcaacgtggtgcgccggcgcagcgagttccgg
cggaccaagcggcgcgaccgtctccacctggtcgagggcctgctgacggcgctggtggac
atcgatgaggtcatccgcctcatccgctccagcgagaacagcgcacaggccaaggagcgg
ctgatcgagcgcttctcgctgagcgacatccagacgcagtacatcctcgacaccccgctg
cgccggctgaccaagttcgaccgaatcgagctggagtcggagcgtgaccgactccaggac
gagatcgagaagctgacggtgatcctggagtcggacaccgagctgcgcaagctcgtctcc
aacgagctggccgcggtcgcgaagaagtacggcacggaccggcggacggttctgctggag
tcggcgggccccgcggtcggcgcggtgccgctggaggtctccgacgacccgtgccgggtg
ctgctctcctcgacggggctgctggcgcgcacggtcaccggggacatggccttcgacatc
gacgccaagcgcgccaagcacgatgtgatcgtttcggcggtgccggcgacgacccgtggc
gaggtgggggcggtgacgtccctgggccggctgctgcggatctcggtgatcgacctgccg
cagctcccggagaccgcggcggcgccgagcctctccggtggcgcgcagctttcggagttc
ctcactctggaggacggcgaggagctgatctgtctgaccacgctggacgagtcctcgccg
ggcctggcgctcggcacggaacagggcgtcgtcaagcggatggtgcccgactacccggcc
aacaaggacgagttggaggtcatcaccctcagggagggcgaccgcatcgtcggcgcggtc
gagctgcgcaccggtgacgaggacctggtcttcatcaccaacgaggcgcagctgctgcgc
tatccggcgtcgcaggtgcggccgcagggccggcccgcgggcggtatgacgggcatcaag
ctgggcgagggcgcgaaggtgatctcgttcgccgcggtcgatccggccaccgacgccatg
gtgttcacggtcgccggctcgcacggcacgctggacgactcggaggcgacggccaagctc
accccgttcgaccagtacccgcgcaagggccgggcgaccggtggggtgcgctgtcagcgg
ttcctgaagggcgaggactgtctgacccaggcgtgggcggtgcccgctccggtacgggcc
gcggacgccaagggcagtccggtggagctgccggaggtggatccgcgccgggacggctcg
ggagtgccgctgccgaagccggtggcggcgctggcggggccggtgtaa
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