Streptomyces sp. RPA4-5: HEP86_32885
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Entry
HEP86_32885 CDS
T10325
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEP86_32885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srpa03000
]
HEP86_32885
03400 DNA repair and recombination proteins [BR:
srpa03400
]
HEP86_32885
Enzymes [BR:
srpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HEP86_32885
Transcription factors [BR:
srpa03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HEP86_32885
DNA repair and recombination proteins [BR:
srpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEP86_32885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
DUF6233
Motif
Other DBs
NCBI-ProteinID:
QIY58416
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All DBs
Position
7391485..7392957
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AA seq
490 aa
AA seq
DB search
MHTDTERCLRAVQSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKPENMRFYPSAAAAQQA
GFRACKRCRPDASPGSPEWNERADLVARAMRLIADGIVDREGVPGLAARLGYSTRQTERQ
LLAELGAGPLALARAQRAQTARLLVETTALPMADVAFAAGFASIRTFNETVREVFALSPT
ELRQRARPGPRATVPGALALRLPFRQPLNPDNLFGHLAATAVPGVEEWRDGAYRRTLHLP
YGHGIVALSPRPDHIDCRLSLTDLRDLAGAIARCRRMLDLDADPEAVDGLLREDPRLAPL
VDKAPGRRVPRTVDADEFAVRAVLGQQVSTAAARTHAGRLVRAHGEQIDDPDGGLSHLFP
SATALAGLDPEQLAMPRTRRATLTGVIAALGSGALQLGVGSDRDAARAQLAALPGIGPWT
VECIAMRALGDPDAFTPTDLGLRRAAAGLGLPHTPAALIRHSALWRPWRAYAVQYLWATD
DHPINHLPTN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgtctgcgggccgtgcagtccaaggacgcccgcttcgac
ggctggttcttcacggccgtgctcaccacccgtatctactgccgtcccagctgccccgtg
gtgcctcccaagccggagaacatgcgcttttacccgagcgctgccgccgcccagcaggcc
ggtttccgggcctgcaagcggtgccgcccggacgccagcccggggtccccggagtggaac
gagcgggccgacctcgtcgcccgcgccatgcggctgatcgccgatggcatcgtcgaccgc
gagggcgtccccggcctcgcggcgcggctcggctacagcacccggcagaccgagcggcag
ctgctggccgagctgggggccgggccgctcgccctggcccgggcccagcgggcgcagacc
gcccggctcctggtggagaccaccgcactgccgatggccgacgtcgccttcgccgccggt
ttcgccagcatccgcaccttcaacgagacggtacgggaggtcttcgcactgtcccctacg
gagctgcggcagcgcgcccggccaggtccgagggcgacggtgcccggtgcgctcgcgctg
cggctgcccttccgccagccgctgaaccccgacaacctcttcgggcatctcgccgccacc
gcggtccccggcgtcgaggagtggcgggacggcgcctaccgccggaccctgcacctcccc
tacgggcacggcatcgtggccctctcgccccgccccgaccacatcgactgccgcctctcc
ctcaccgatctgcgcgatctggccggtgccatcgcccgctgccgccggatgctcgacctc
gacgcggacccggaagccgtcgacgggctgctccgcgaggacccgcggctggccccgctc
gtcgacaaggcgcccggccgccgggtcccgcgcacggtcgacgcggacgagttcgcggtc
cgcgccgtcctcggccagcaggtctccaccgcggcggcccgcacccacgccggacggctg
gtccgtgcccacggcgaacagatcgacgacccggacggcggcctcagccatctcttcccg
tccgccaccgcgctcgccggactggacccggagcagctggcgatgccccgcacccgccgg
gccaccctcaccggcgtcatcgccgccctcggctccggtgcgctgcaactgggcgtcggc
agcgaccgggacgccgcccgggcgcagctcgcggcgctgcccggcatcggcccctggacc
gtcgagtgcatcgccatgcgcgcgctcggcgacccggacgccttcacccccaccgacctc
ggtctgcgccgcgcggccgccggcctcggcctgccgcacaccccggcggctctcatccgg
cactccgcgctctggcgcccctggcgcgcatacgccgtccagtacctctgggcgaccgac
gaccaccccatcaaccacctcccgacgaactga
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