Streptomyces sp. RPA4-2: HEP85_00625
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Entry
HEP85_00625 CDS
T10422
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz00521
Streptomycin biosynthesis
srpz00523
Polyketide sugar unit biosynthesis
srpz00525
Acarbose and validamycin biosynthesis
srpz00541
Biosynthesis of various nucleotide sugars
srpz01055
Biosynthesis of vancomycin group antibiotics
srpz01100
Metabolic pathways
srpz01110
Biosynthesis of secondary metabolites
srpz01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HEP85_00625 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HEP85_00625 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HEP85_00625 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HEP85_00625 (rfbB)
00525 Acarbose and validamycin biosynthesis
HEP85_00625 (rfbB)
Enzymes [BR:
srpz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HEP85_00625 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
adh_short
NmrA
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
QIY60480
UniProt:
A0A6H1KAI5
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Position
complement(122117..123127)
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AA seq
336 aa
AA seq
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MSQTRILVTGGAGFIGSHYVRTLLGPLGPDDVSVTVLDAFTYAANRASLDEVADSPRFRL
VVGDICDPDVVGPLIAEHDQVVHFAAESHVDRSLSSSAEFVRTNVMGTQVLLDAALQHGI
GTFVHVSTDEVYGSISTGSCSEEQSVNPNSPYAASKAASDLLALVYHRSHDLDVRVTRCS
NNYGHHQYPEKIIPLFVSLLLQGRKVPLYGDGMNVRDWLHIDDHVRGIELVRTRGRAGEI
YNIGGGTELDNRRLTERLLEACGASWDQVEYVTDRKGHDRRYSVDWSKAHTELGYKPQKD
FTEGLAETVAWYRDNRDWWEPAATEADGPATGTPAC
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagacacgcatcctggtgaccggcggtgccggcttcatcggttcccactacgtc
cgcaccctcctcggccccctcggccccgacgacgtctcggtgaccgtcctggacgccttc
acctacgccgccaaccgggccagcctcgacgaggtcgccgactccccccgcttccggctc
gtcgtcggcgacatctgcgacccggacgtcgtcggccccctcatcgccgagcacgaccag
gtcgtccacttcgcggccgagtcgcacgtcgaccgctcgctgtccagctccgccgagttc
gtccgcaccaacgtcatgggcacccaggtgctcctggacgccgcactgcagcacggcatc
ggcaccttcgtgcacgtctccaccgacgaggtctacggctccatctcgaccggctcctgc
tccgaggagcagtccgtgaaccccaactcgccctacgccgcctccaaggccgccagcgac
ctgctcgccctggtctaccaccgctcccacgacctggacgtacgggtgacccgctgctcc
aacaactacggccaccaccagtaccccgagaagatcatcccgctcttcgtcagcctcctc
ctgcagggcaggaaggtcccgctgtacggcgacgggatgaacgtgcgcgactggctgcac
atcgacgaccacgtccgcggcatcgaactggtccgcacccggggacgggccggcgagatc
tacaacatcggcggcggcaccgagctcgacaaccggcggctcaccgaacgcctcctggag
gcgtgcggcgcgtcctgggaccaggtcgagtacgtcaccgaccgcaagggccacgaccgc
cgctactcggtcgactggagcaaggcccacaccgagctgggctacaaaccgcagaaggac
ttcaccgagggcctcgccgagaccgtcgcctggtaccgcgacaaccgcgactggtgggag
cccgccgccaccgaggccgacgggcccgcgaccgggacccccgcatgctga
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