Streptomyces sp. RPA4-2: HEP85_05040
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Entry
HEP85_05040 CDS
T10422
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz00300
Lysine biosynthesis
srpz00470
D-Amino acid metabolism
srpz01100
Metabolic pathways
srpz01110
Biosynthesis of secondary metabolites
srpz01120
Microbial metabolism in diverse environments
srpz01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HEP85_05040 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HEP85_05040 (lysA)
Enzymes [BR:
srpz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HEP85_05040 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QIY61157
UniProt:
A0A6H1K295
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All DBs
Position
1201147..1202562
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AA seq
471 aa
AA seq
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MSIQDAPLQDLAFQAPSRALGTAGTAGTADDCDARDARDADGLSVWPRSARSAADGDVRV
GGVSLTETADRYGTPVYVLDEREVRERCRTYRTAFPEADVVYAAKAFLSRAMVRWVREEG
LGLDVCSAGELELAVATGFPPEKIVMHGNAKSPEDLRAALGLGVGRIVVDSDSEITRLAA
VVPADGRQKVMVRVVPGIAAGGHAKVRTGTDDQKFGLSITDGSAEHAVARILDQPHLELV
GLHCHIGSQIASVQPYVTAVRRVVDLMARIRDQHGVALPQLDIGGGHAIAYRPGEESLNA
GVLAGRVRAELEDGCARAGLPVPRLTLEPGRAIVGPAGVAVYRVLAVKRTGEHTFVAVDG
GMSDNPRPALYGVRYAPRLVGRPSAVPPRLVTVVGRHCEAGDVLAEDVALPGDVHPGDLL
AVPAAGAYHLSMASGYNLVGRPPVVAVSDGTARVLVRRESLDDMSRRDIGL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccaggacgccccccttcaggacttggcctttcaggcaccgtcccgcgccctc
ggtaccgccggcaccgccggcaccgccgacgactgtgacgccagggacgccagagacgcc
gacggcctgtccgtgtggccccgctccgcccgctccgccgccgacggcgacgtccgtgtc
ggcggcgtttccctcaccgagaccgccgaccgctacggcacccccgtctacgtactcgac
gagcgggaggtccgcgaacgctgtcgcacgtaccgcacggcgttccccgaggccgacgtc
gtctacgcggccaaggcgttcctgtcccgggccatggtgcgctgggtgcgggaggagggc
ctcggcctcgacgtctgctccgccggggaactcgaactcgccgtggccaccggcttcccg
ccggagaagatcgtgatgcacggcaacgccaagagccccgaggacctgcgcgcggcgctc
ggtctcggcgtcggccgcatcgtcgtggacagtgactccgagatcacccgactggccgcg
gtcgttcccgccgacggccgtcagaaggtcatggtgcgggtggtgcccggcatcgcggcg
ggcgggcacgccaaggtgcgcaccgggaccgacgaccagaagttcggtctgtcgatcacg
gacggatccgcggagcacgccgtcgcccggatactcgaccagccgcacctcgaactcgtc
ggcctgcactgccacatcggctcgcagatcgcctccgtgcagccgtacgtcaccgcggta
cgccgcgtggtcgatctgatggcccggatccgcgaccagcacggcgtcgctctcccccag
ttggacatcggcggcggtcacgccatcgcctaccggcccggcgaggagagcctgaacgcc
ggagtcctggccggtcgggtccgcgccgaactcgaggacggctgcgctcgcgccgggctg
cccgtgcccaggctcaccctcgaacccggccgggcgatcgtcggccccgcgggagtcgcc
gtctaccgggtcctcgcggtcaagcgcaccggggaacacaccttcgtggccgtcgacggc
ggtatgagcgacaacccgaggcccgcgctgtacggggtgcggtacgcgccccggctcgtc
ggccggccctcggcggtgccgccccgtctcgtcaccgtcgtcggccggcactgcgaggcg
ggggacgtcctcgcggaggacgtggcgctcccgggcgacgtgcaccccggtgacctcctc
gccgtccccgcggccggcgcgtaccacctctccatggcctccggctacaacctggtcggc
cggccgccggtggtggcggtgtccgacggtaccgcccgcgtcctggtgcgccgcgagtca
ctggacgacatgagccgccgggacatcgggctgtag
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