Streptomyces sp. RPA4-2: HEP85_08040
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Entry
HEP85_08040 CDS
T10422
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HEP85_08040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srpz02000
]
HEP85_08040
Transporters [BR:
srpz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HEP85_08040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QIY61640
LinkDB
All DBs
Position
complement(1879540..1880697)
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AA seq
385 aa
AA seq
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MTVFLPRTAVLTGGLAVAAALALSACGAAPDDKATTADGKSAATATSAADFGGLDALVKA
AKKEGTLHAIALPRDWANYGALIDGFTKKYGIKIDVENPAGSSQDEINAVTSRKGQDRAP
DVLDLGSSFALSAAQQGLLAPYQVTSFADIPEAQKDPKGQWFNDYGGYVSIGCDAKKVKE
CPKTFADLLKPQYKGQVALNGNPTKSGSAFAGVYAAALANGGSFDDIQPGIDFFGKLKKS
GNYTPVESTPATVEKGETPISIDWDYLNAGYADEFNSKGLDWTVTVPSDGQFSQYYSQAI
NKDAPHPAAARLWQEYLYSTEGQNLWVKGYARPALMPAMDKAGTLDKTAAARLPKVTGTP
SFPTEDQQNKAKGILAQGWGKAVSG
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgttcctgccgaggaccgccgtcctcaccggcggcctcgccgtcgccgccgcc
ctcgccctcagcgcctgtggcgcggcccccgacgacaaggcgaccaccgccgacggcaag
agcgcggccaccgcgacctccgccgcggacttcggtggtctcgacgccctcgtgaaggcg
gcgaagaaggagggcacgctgcacgcgatcgcgctgccccgtgactgggccaactacggc
gcgctgatcgacggcttcaccaagaagtacggcatcaagatcgacgtggagaacccggcc
ggctccagccaggacgagatcaacgccgtcacctcgcgcaagggccaggaccgcgccccc
gacgtcctcgacctgggcagctcgttcgcgctgagcgccgcccagcagggcctgctcgcc
ccctaccaggtcacctcgttcgccgacatccccgaggcccagaaggacccgaaggggcag
tggttcaacgactacggcggctacgtctccatcggctgcgacgccaagaaggtcaaggag
tgccccaagaccttcgccgacctgctcaagccgcagtacaagggccaggtcgccctcaac
ggcaaccccaccaagtccggttcggcgttcgccggcgtgtacgcggccgccctcgccaac
ggcggctccttcgacgacatccagcccggcatcgacttcttcggcaagctgaagaagagc
ggcaactacacgcccgtcgagtcgaccccggccaccgtcgagaagggcgagacgccgatc
agcatcgactgggactacctgaacgccggctacgccgacgagttcaactccaagggcctc
gactggacggtcactgtcccctccgacggtcagttctcccagtactactcgcaggccatc
aacaaggacgccccgcacccggcggccgcccgcctgtggcaggagtacctctacagcacc
gagggccagaacctctgggtcaagggatacgcccgcccggccctgatgccggccatggac
aaggccggcacgctcgacaagaccgccgccgcccggctccccaaggtcacgggcacgccg
agcttcccgaccgaggaccagcagaacaaggccaagggcatcctcgcccagggctggggc
aaggccgtctccggatga
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