Streptomyces sp. RPA4-2: HEP85_08310
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Entry
HEP85_08310 CDS
T10422
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HEP85_08310 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srpz03400
]
HEP85_08310 (ruvB)
Enzymes [BR:
srpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP85_08310 (ruvB)
DNA repair and recombination proteins [BR:
srpz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HEP85_08310 (ruvB)
RecFOR pathway proteins
HEP85_08310 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
DUF815
nSTAND3
Sigma54_activat
AAA_14
AAA_3
RNA_helicase
Sigma54_activ_2
AAA_28
TsaE
AAA_18
Zeta_toxin
AAA_25
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QIY61684
UniProt:
A0A6H1KGJ3
LinkDB
All DBs
Position
complement(1940689..1941759)
Genome browser
AA seq
356 aa
AA seq
DB search
MNWDDTTDETAADRLVGASADREDQAVEAALRPKDLDEFIGQEKVREQLDLVLRAARARG
ATADHVLLSGAPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSLQEGEVLFL
DEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRAGLLPPPLR
DRFGFTAHMEFYEPAELQRVIHRSANLLDVEIGTEGAAEIAGRSRGTPRIANRLLRRVRD
YAQVKADGIITREIAAAALKVYEVDARGLDRLDRGVLEALLKLFGGGPVGLSTLAVAVGE
ERETVEEVAEPFLVREGLLARTPRGRVATPAAWAHLGLTPPQRAMGGNGQGDLFGA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggacgacacgaccgacgagaccgccgccgaccggctcgtcggcgcgtccgcc
gaccgtgaggaccaggccgtcgaggcggccctgcgccccaaggacctggacgagttcatc
ggccaggagaaggtccgcgagcagctcgacctcgtgctgcgcgccgcccgcgcccgcggc
gccaccgccgaccacgtgctgctctccggcgcccccggtctgggcaagaccactctctcg
atgatcatcgcggccgagatgggcgcccccatccgcatcaccagcggccccgccatccag
cacgcaggcgacctcgccgcgatcctctcctcgctccaggagggcgaggtgctcttcctg
gacgagatccaccgcatgtcccggcccgccgaagagatgctctacatggcgatggaggac
ttccgggtcgacgtgatcgtcggcaagggcccgggagccaccgcgatccccctggagctg
ccgcccttcaccctggtcggcgccaccacccgggcaggactgctgccgcccccgctgcgc
gaccgcttcggcttcaccgcacacatggagttctacgagcccgccgagctgcagcgcgtc
atccaccgctccgcgaacctcctcgacgtcgagatcggcaccgagggcgccgccgagatc
gccggccgctcccgcggcaccccccgtatcgccaaccgtctgctgcgccgggtccgggac
tacgcgcaggtcaaggccgacggcatcatcacccgcgagatcgccgccgcggcgctgaag
gtctacgaggtcgacgcccgcggcctcgaccgcctcgaccgaggtgtcctggaagccctg
ctcaagctcttcggcggcggcccggtggggctgtccacgctcgcggtcgccgtgggggag
gagcgggagaccgtggaggaggtcgccgagcccttcctggtgcgcgagggactgctcgcc
cgtacgccccgtggtcgcgtcgcgactccggcggcatgggcacatctcggtctcaccccg
ccccagcgggccatggggggaaacggacaaggggacctgttcggggcgtga
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