Streptomyces sp. RPA4-2: HEP85_08590
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Entry
HEP85_08590 CDS
T10422
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
srpz Streptomyces sp. RPA4-2
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srpz03000
]
HEP85_08590
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
srpz01504
]
HEP85_08590
Transcription factors [BR:
srpz03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
HEP85_08590
Antimicrobial resistance genes [BR:
srpz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
HEP85_08590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_11
Xre-like-HTH
TetR_C_43
TetR_C_24
HTH_Tnp_ISL3
HTH_20
DUF6471
LacI
HTH_31
HTH_24
HTH_IclR
TrmB
HTH_AraC
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
QIY61725
UniProt:
A0A6H1KIK8
LinkDB
All DBs
Position
complement(1991691..1992236)
Genome browser
AA seq
181 aa
AA seq
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MAVDRDHVLRSAAALLTRRSTATMDEVARAAGISRATLHRQFAGRDALVRALEALGIEEC
EAALDAARLDDGTAQEALRRLVRELEKAAGLLSFLYTENQLFEGEEQHEGWARLDARFAA
LFRRGQDSGEFRIDLTPAWLTEALYGLIASGAWAVLEGRVATKDFTFMIVELLLGGALRR
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgaccgtgaccatgtgctgcgcagcgcggccgccctcctcacccgcagatcc
accgccaccatggacgaggtcgcccgagcggccgggatcagcagggccacgctgcaccgc
cagttcgccgggcgtgacgcgctcgtgcgggcgctggaagcgctcggcatcgaggagtgc
gaggcggccctggacgccgcccgcctcgacgacggcaccgcgcaggaggcgctgcgccgt
ctggtgcgcgagctggagaaggccgccggactcctctccttcctctacaccgagaaccag
ctgttcgagggcgaggagcagcacgagggctgggcccggctcgacgcccgtttcgccgcg
ctgttccggcgcggccaggacagcggcgaattccgcatcgacctcaccccggcctggctc
accgaggcgctctacgggctgatcgcctcgggcgcctgggcggtgctggaggggcgggtc
gccaccaaggacttcaccttcatgatcgtcgagctgctgctcggcggcgcgctacggaga
gagtga
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