Streptomyces sp. RPA4-2: HEP85_09000
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Entry
HEP85_09000 CDS
T10422
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
srpz Streptomyces sp. RPA4-2
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
srpz03051
]
HEP85_09000 (pafA)
Enzymes [BR:
srpz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
HEP85_09000 (pafA)
Proteasome [BR:
srpz03051
]
Prokaryotic proteasome
Bacterial regulatory particles
HEP85_09000 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
QIY61789
LinkDB
All DBs
Position
complement(2081058..2082419)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFCERRGIRTGTV
EQVLELWGRVLDSIEAEDLDRIGTEIDWVMKYKLIERYRAKHNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLERKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgtacgttcagggga
cagcggcgcctgtctcccgacgaggtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtctttctgcggaacggtgcccgcctctatctcgacgtgggatca
catccggaatacgcgacacccgaatgtgacaacgtgacggaactcgtcacccacgacaaa
gccggcgagcgcattctcgaaggactcctggtggacgcagaacgacgcctgcacgaggaa
ggaatcgcgggcgacgtctacctgttcaagaacaacaccgactcggccggcaactcgtac
gggtgccacgagaactacctggtggctcgccacggggagttctcccgactcgcggacatc
ctcattccgttcctggtcacgcggcagctgctgtgcggcgccggcaaggtgctgcagact
ccgcgcggcgccgtgtactgcgtcagccagcgtgccgagcacatctgggagggcgtcagc
tccgcgacgacccgctcccggcccatcatcaacacccgcgacgaaccacacgccgacgcc
gagcgctaccgccggctgcacgtcatcgtcggcgattcgaacatgtccgagacgaccatg
ctcctgaaggtcggcgccaccgacctggtactgcgcatgatcgaggccggcacggtgatg
cgcgacctcaccctggagaacccgatccgggcgatccgcgaggtgagccacgacatcacg
ggccgccgcaaggtgcggctggccagtggccgtgaggcctccgccctcgaggtgcagcgc
gagtactacgagaaggccgtggacttctgcgagcgccgcggcatccgcaccgggaccgtc
gaacaggtcctcgaactgtggggccgggtgctcgactcgatcgaggcggaggacctcgac
cggatcggtaccgagatcgactgggtcatgaagtacaagctcatcgagcggtaccgggcc
aagcacaacatgacgatgtcgcacccgagggtcgctcagatagacctcgcctaccacgac
atccaccgtcgtcgtggcctgtactacctgctggagaggaagggacaagccgctcggatc
tgcaatgacttgaagatcttcgagggcaagtccgtgccgccccagaccactcgggcgcgg
ctgcgcggggacttcatccggcgagcccaggaacagcgccgcgatttcaccgtcgactgg
gttcacctcaagctcaacgaccaggcacagcgcaccgtgttgtgcaaggacccgttccgt
tcggtcgacgaccgggtggagaagctgatcgccggaatgtga
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