Streptomyces sp. RPA4-2: HEP85_09765
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Entry
HEP85_09765 CDS
T10422
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
srpz Streptomyces sp. RPA4-2
Brite
Enzymes [BR:
srpz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HEP85_09765
Ribosome biogenesis [BR:
srpz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HEP85_09765
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SPP1_Dit
Val_tRNA-synt_C
Motif
Other DBs
NCBI-ProteinID:
XDO60823
LinkDB
All DBs
Position
complement(2255121..2256350)
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AA seq
409 aa
AA seq
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MQTTRRRRNFDAKQWQWQEQRTRQPPGDRRGRLSAPEWRGRSPAPERRRRLSAPEWRGRF
PVEERRGRLPAPERRRERRRQAEARLSKPRPEERRYDVGPGATHEGPKSGRGNAARGGAK
GGPKQGQQRGGRTEPARSREYETRAEERNRDRYAGKPEVKLPKTFPGAEQEGERLQKVLA
RAGYGSRRACEELVEQARVEVNGQIVTEQGLRVDPEKDEIRVDGLTVATQSYQFFSLNKP
AGVVSTMEDTEGRQCLGDYVTNRETRLFHVGRLDTETEGVILLTNHGELAHRLTHPKYGV
KKVYLAHIVGPIPRDLGKRLKDGIQLEDGYAKADHFRVVEQTGKNYLVEVTLHEGRKHIV
RRMLAEAGFPVDKLVRVAFGPITLGDQKSGWLRRLSNTEVGMLMNEVDL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgacacgacgacgacggaactttgatgcgaagcagtggcagtggcaggaacag
cggacgcggcaacccccgggggaccggcgggggcggctctcagccccggagtggcggggg
cggtccccagccccggagcggcggaggcggctctcagccccggagtggcgggggcggttc
ccagtcgaggagcggcgggggcggctcccagccccggagcggcggagggagcggcgacga
caggccgaagcgcgcttaagcaagccccgtcccgaggagcgccgctacgacgtaggcccc
ggcgccacccacgagggaccgaagtccgggcgcggcaacgcggcccgcggcggcgccaag
ggcggccccaagcagggccagcagcgcggcggccgtacggagcccgcgcgctcccgtgag
tacgagacgcgggccgaggagcgcaaccgggaccggtacgcgggcaagcccgaggtcaag
ctgcccaagaccttcccgggcgccgagcaggagggcgagcgtctgcagaaggttctcgcg
cgggcgggctacggctcccgtcgtgcctgtgaggagctcgtcgagcaggcccgggtcgag
gtcaacggccagatcgtcaccgaacaggggctgcgcgtcgaccccgagaaggacgagatc
cgggtcgacggtctgaccgtcgccacgcagtcgtaccagttcttctcgctgaacaagccc
gccggtgtcgtctccaccatggaggacaccgagggccggcagtgcctcggggactacgtg
acgaaccgcgagacgcggctcttccacgtcgggcggctcgacaccgagaccgagggcgtc
atcctgctcaccaaccacggcgagctggcgcaccggctgacccacccgaagtacggcgtg
aagaaggtctacctcgcgcacatcgtcggcccgatcccgcgtgacctgggcaagcggctc
aaggacggcatccagctggaggacgggtacgcgaaggcggaccacttccgcgtcgtcgag
cagaccggcaagaactacctggtcgaggtgaccctccacgagggccgcaagcacatcgtg
cgccgcatgctcgccgaggccggcttcccggtggacaagctcgtacgcgtcgccttcggc
ccgatcaccctcggcgaccagaagtcgggctggctgcgccgactgtcgaacaccgaggtc
ggcatgctcatgaacgaggtcgacctctag
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