KEGG   Streptomyces sp. RPA4-2: HEP85_13995
Entry
HEP85_13995       CDS       T10422                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
srpz  Streptomyces sp. RPA4-2
Brite
KEGG Orthology (KO) [BR:srpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:srpz03016]
    HEP85_13995
Enzymes [BR:srpz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     HEP85_13995
Transfer RNA biogenesis [BR:srpz03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    HEP85_13995
 Prokaryotic type
    HEP85_13995
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1 Lactamase_B_4
Other DBs
NCBI-ProteinID: QIY62574
LinkDB
Position
complement(3187533..3188438)
AA seq 301 aa
MSVRELVVLGTASQVPTRHRNHNGYLLRWDGEGLLFDPGEGTQRQMLRAGVAAHDLHRIC
VTHFHGDHSLGLAGVIQRVNLDRVPHEVTAHFPRSGQSFFDRLRYATAYRETVALTEAPV
DTDGVLAATASYTLEARRLSHPVESFGYRLVEPDGRRILPERLAAHGIKGPDVGRIQREG
ALAGVRLDDVSEVRRGQRFAFVMDTRLCEGVDALAEGCDLLVIESTFLDEDHRLASDHGH
LTAGQAARVARDAGVRHLVLTHFSQRYSDPEEFERQARAAGFDGELTVAHDLMRVPVPKR
S
NT seq 906 nt   +upstreamnt  +downstreamnt
ttgtccgtacgtgaactggtggtcctcggcaccgccagccaggtcccgacccggcaccgc
aaccacaatggctatctgctgcgctgggacggggaggggctgctcttcgaccccggcgag
ggcacccagcggcagatgctgcgggccggggtcgccgcgcacgacctgcaccggatctgc
gtcacgcacttccacggcgaccactcgctcgggctcgccggggtgatccagcgcgtcaac
ctcgaccgcgtgccgcacgaggtcaccgcgcacttcccccgttccggtcagagcttcttc
gaccggttgcggtacgccaccgcctaccgcgagaccgtcgcgctcaccgaggcgccggtc
gacacggacggcgtgctcgcggccacggcctcgtacaccctggaggcccgcaggctctcc
caccccgtggagtccttcggataccggctggtcgagccggacggacggcggatactgccc
gagcggctcgccgcgcacggcatcaaggggccggacgtcggacggatccagcgcgaggga
gccctggccggagtccgtctggacgacgtcagcgaggtgcggcgcggacagcggttcgcg
ttcgtcatggacacccggctgtgcgagggggtggacgccctcgccgagggctgcgacctg
ctcgtcatcgagtcgacgttcctggacgaggaccaccggctcgcctccgaccacgggcac
ctgacggccggtcaggcggcccgggtggcacgcgacgcgggcgtacggcatctggtgctc
acgcacttcagtcagcggtactccgatcccgaggagttcgagcggcaggcgcgggccgcc
gggttcgacggggagctgaccgtggcgcacgatctgatgcgggtgccggttccgaagcgc
tcataa

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