Streptomyces sp. RPA4-2: HEP85_15515
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Entry
HEP85_15515 CDS
T10422
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HEP85_15515 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srpz03019
]
HEP85_15515 (orn)
03009 Ribosome biogenesis [BR:
srpz03009
]
HEP85_15515 (orn)
Messenger RNA biogenesis [BR:
srpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HEP85_15515 (orn)
Ribosome biogenesis [BR:
srpz03009
]
Eukaryotic type
Pre-60S particles
RNases
HEP85_15515 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QIY62800
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All DBs
Position
3542837..3543439
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLSEDALIEVAALVTDSELNVLGEGVDIVIRPPDAALETMPDVVR
QMHTASGLLSELAAGTTLADAEEQVLSYVREHVKEPGKAPLCGNSVGTDRGFLLRDMPTL
EDYLHYRIVDVSSVKELARRWYPRAYFNSPDKNGNHRALADIRESIAELRYYREAIFVPQ
PGPDSETARTIAAKHVLPVE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccgggctctcgctgtcggaggac
gcactcatcgaggtggccgcgctggtcaccgactcggagctgaacgtgctcggcgaaggg
gtggacatcgtgatccgcccgccggacgcggccctggagacgatgccggacgtggtgcgc
cagatgcacacggcctccggcctcctctccgaactcgccgcgggcaccaccctggccgac
gccgaggaacaggtcctctcctacgtgcgtgagcacgtcaaggagccgggcaaggccccg
ctgtgcgggaactcggtcggcacggaccggggtttcctgctccgcgacatgcccacactg
gaggactatctccactaccgcatcgtggacgtctcctccgtcaaggagctggcccgccgc
tggtacccgcgggcgtacttcaacagcccggacaagaacggcaaccaccgcgccctcgcc
gacatccgcgagtccatcgccgaactccgctactaccgcgaggcgatcttcgtcccgcag
cccggccccgactcggagaccgcccgcaccatcgcggcgaagcacgtactgcccgtggaa
tga
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