Streptomyces sp. RPA4-2: HEP85_15885
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Entry
HEP85_15885 CDS
T10422
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
srpz Streptomyces sp. RPA4-2
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srpz03400
]
HEP85_15885
DNA repair and recombination proteins [BR:
srpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
HEP85_15885
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
IL32
Motif
Other DBs
NCBI-ProteinID:
QIY62852
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All DBs
Position
3624345..3624863
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AA seq
172 aa
AA seq
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MTAPTPEPDPSQTPWVPPEGSWASSAARRRNMQAIRSRDTTPERLVRRLVHAQGLRYRVA
TRPLPDLRRTADMVFRPAKVAVFIDGCYWHGCPDHYVPPKTNPGYWSDKVARNMARDRDT
DERLQAAGWLVLRFWEHESAEECSEMICHAVTSRRHASPGSTPDIPTEQGTS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcccaccccagaaccagatccgtcacagaccccctgggtgccgcccgagggc
tcatgggcatcgtccgccgcacgccgccgcaacatgcaggcgatccgaagccgggacacc
actccggagcgccttgtccgtcggctagtacacgctcagggcctgcggtaccgagtagca
acccgcccgctccccgaccttcgccgcaccgccgacatggtctttcggccggcgaaggtg
gccgtcttcatcgacggctgctactggcacggctgccctgaccattacgtccccccgaag
accaaccctggctactggtccgacaaagtggcccggaatatggcccgcgaccgcgatacg
gatgagcgcctacaggcagctggctggctcgtcttgcgcttctgggagcacgaatcagcg
gaagaatgcagcgagatgatctgtcacgcagtgacatccagacgtcacgcttcgcccggc
agcacgccggacatccctactgagcaagggacatcttga
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