KEGG   Streptomyces sp. RPA4-2: HEP85_16950
Entry
HEP85_16950       CDS       T10422                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
srpz  Streptomyces sp. RPA4-2
Brite
KEGG Orthology (KO) [BR:srpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:srpz03021]
    HEP85_16950
Transcription machinery [BR:srpz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HEP85_16950
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_Crp_2 MarR_2 HTH_23 HTH_24 HTH_3 Sigma70_ECF DUF7343 Apolipoprotein MarR IF2_N GerE DUF1492
Other DBs
NCBI-ProteinID: QIY67394
LinkDB
Position
3872090..3872998
AA seq 302 aa
MSPRLDASQTQRATSAPSPEHPDHAPADHGADLAGLEGLPEIPPYDEVGAVDARALSKTL
FERLESLEEGTHDYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAIDR
FELSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQRLDRSP
TVGELAERLGITNDEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGYEDHGLEGIEY
VESLKPLIAGLPPRDRQILSLRFVANMTQSEIGDELGISQMHVSRLLSRTLVRLRRGLTV
EE
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtcaccccggctcgacgcatcgcagacccagagggcgacgtcggcaccctctccggag
cacccggaccacgctcccgccgaccacggcgcggacctcgcgggcctggaaggacttccg
gagatccccccgtacgacgaggtgggggcggtggacgcacgagccctgtccaagacgctc
ttcgagcgcctggagtccctcgaagagggcacccacgactactcgtacgtccgcaacacg
ctcgtcgaactcaacctcgcgctggtgaagttcgccgcctcccgcttccgctcccgcagc
gagccgatggaggacatcatccaggtcggcacgatcggcctgatcaaggcgatcgaccgc
ttcgagctgagccgcggcgtggaattccccaccttcgccatgccgaccatcatcggcgag
atcaagcgcttcttccgcgacacctcctggtccgtgcgcgtgccgcgccggctgcaggaa
ctccggctcgacctggccaaggccggcgacgaactcgcccagcgcctcgaccggtcaccc
accgtcggcgagttggccgaacgcctgggcatcaccaacgacgaggtcgtcgagggcatg
gccgcctcgaacgcctacacggccagctcgctggacgcccagcccgaggaggacgactcc
gagggcgcgctcgcggaccgcatcggctacgaggaccacgggctcgaaggcatcgagtac
gtggagtccctcaagcccctgatcgccggtctcccgccgcgcgaccggcagatcctgtcg
ctgcgcttcgtcgccaacatgacccagtccgagatcggcgacgaactcggcatctcgcag
atgcacgtgtcgcggctgctgtcgcgcacgctggtgcggctccgcaggggcctcacggtc
gaggagtga

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