Streptomyces sp. RPA4-2: HEP85_18575
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Entry
HEP85_18575 CDS
T10422
Name
(GenBank) DNA repair helicase XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz03420
Nucleotide excision repair
Brite
Enzymes [BR:
srpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP85_18575
Transcription machinery [BR:
srpz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HEP85_18575
DNA repair and recombination proteins [BR:
srpz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HEP85_18575
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SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QIY63270
UniProt:
A0A6H1KIA7
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Position
4237171..4238814
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AA seq
547 aa
AA seq
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MNGPLIVQSDKTLLLEVDHEQADACRRVIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVEFSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTSTDRPVLEEVLR
SKRIAPLVGARIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHAIDLAEDGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAEAEEKYRFCATTATKRKVTEALVRKFAGQQILVIGQYIDQ
LDELGEHLDAPVIKGETSNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRILDA
DELLTDS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggtcccctcatcgtccagtccgacaagaccctgctcctggaggtcgaccacgag
caggcagacgcctgtcgccgggtcatcgcgccgttcgcggagctggagcgggcgcccgag
cacatccacacctaccgggtgacgccgctcgggctgtggaacgcgcgggccgcgggtcac
gacgccgaacaggtcgtcgacgccctcgtcgagttcagccgctacccggtgccgcacgcg
ctgctcgtcgacatcgccgagacgatggaccgctacggccggctcacgctgagcaagcac
ccggcgcacggactcgtcctgaccagcaccgaccggcccgtgctcgaagaggtgctgcgg
tcgaagcggatcgcgccgctggtcggcgcccggatcgaccccgacaccgtggccgtgcac
ccctccgagcgcgggcagatcaagcagacgctgctgaagctgggctggccggccgaggac
ctcgccgggtacgtggacggtgaggcgcacgccatcgacctggccgaggacgggtgggcg
ctgcggccctaccagaagcaggccgtggagaacttctggcacggcgggtccggggtcgtg
gtgctgccctgcggcgccggcaagacgctcgtcggcgccggggccatggcgcaggccaag
gccaccaccctcatcctcgtcaccaacaccgtctccgcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcgggacgcgcaaggag
atccggccggtcaccatcgcgacgtaccaggtgctgacgacgaagcggaagggcgtctat
ccgcacctcgaactcttcgactcccgcgactggggtctgatcgtctacgacgaggtgcac
ctgctgcccgcgccggtcttcaagttcaccgccgatctgcaggcgcggcggcggctgggc
ctgaccgccaccctggtccgtgaggacgggcgcgagtcggacgtcttctcgctcatcgga
cccaagcggttcgacgctccgtggaaggagatcgaggcgcagggatacatcgcgcccgcg
gactgtgtggaggtacgggtcaatctgaccgactccgagcggctcgcgtacgccaccgcg
gaggcggaggagaagtaccgcttctgcgcgacgaccgcgaccaagcggaaggtgacggag
gcgctggtacggaagttcgccgggcagcagatcctggtgatcggccagtacatcgaccag
ctcgacgagctgggcgagcatctggacgcgccggtcatcaagggcgagacgagcaacgcg
cagcgcgagaaactgttcgacgcgttccgtgagggcgagatcagcgtgctcgtggtgtcg
aaggtcgccaacttctccatcgacctgccggaggcgaccgtcgccatccaggtgtcgggc
accttcggctcgcgccaggaggaggcccagcggctgggacgggtgctacgtccgaaggcc
gacggccaccaggcccacttctactcggtcgtcgcccgcgacaccatcgaccaggacttc
gccgcccaccggcagcggttcctggcggagcaggggtacgcctaccggatcctggacgcg
gacgagctgctgaccgacagctga
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