Streptomyces sp. RPA4-2: HEP85_20620
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Entry
HEP85_20620 CDS
T10422
Symbol
cydD
Name
(GenBank) thiol reductant ABC exporter subunit CydD
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HEP85_20620 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srpz02000
]
HEP85_20620 (cydD)
Transporters [BR:
srpz02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
HEP85_20620 (cydD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
RsgA_GTPase
SMC_N
AAA_22
AAA_29
AAA_25
AAA_16
AAA_24
MMR_HSR1
ATP-synt_ab
AAA_18
nSTAND3
AAA_33
AAA_5
AAA_7
NACHT
AAA
AAA_28
NB-ARC
DUF87
T2SSE
TsaE
Mg_chelatase
APS_kinase
MobB
nSTAND1
EhaL
ATP_bind_1
PduV-EutP
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XDO61044
LinkDB
All DBs
Position
complement(4677862..4681431)
Genome browser
AA seq
1189 aa
AA seq
DB search
MKPIDPRLLRYARATRVFLLTVVGLGAVGAALVIAQAMLIAEVVVGAFQHGHSAPELRTP
LLLLVVVALGRALVAWLTELAAHRASAAVKSELRGRLLERAAALGPGWLGGQRTGSLVAL
ATRGVDALDDYFSRYLPQLGLAIVVPVAVLARIVTEDWVSAAIIVVTLPLIPVFMVLIGW
ATRARMDRQWRLLSRLSGHFLDVVAGLPTLKVFGRAKAQAESIRRITGEYRQATMRTLQI
AFLSSFALELLATISVALVAVTIGMRLVHGDMDLYVGIVILVLAPEAYLPLRQVGAQYHA
AAEGLAAAEEIFAVLETPLPAGGSLPVPEGEITFDAVTVRYPGRSGDAVRDVSFVVAQGE
TVALVGPSGVGKSTLLNVLLGFVEPTAGRVRVGGADLAGCDVAEWRSRVAWVPQRPHLFA
GSIVENVRLARPDADDAAVRRALADAGALEFVDALSDGARTMLGEDGSGLSAGQRQRLAL
ARAFLADRPVLLLDEPTASLDGTTEAEVVSAVRRLAVGRTVLLVVHRPALLGVADRVVRL
EPGAPTTAAGPAPAGTTTRPRPAEPEGVPAVAPEESLAVSRGRGDVLARTRAMAGPRSGR
FALALLLASLALASAVGLMATSGWLISRASQQPPVMYLMLAVTATRAFGIGRAVFRYAER
LVSHDAVLRMLADTRVAVYRRLERLAPAGLRTTRRGDLLSRLVADVDALQDYWLRWLLPA
GAAVLVSTASVGFTAWLLPEAGAALAAGLLAAGAGVPLVTGAVARRAQRRLAPARGILAT
RVTDLLTGTAELTVAGALAARTAEARRADTVLTRIASRSATATALGDGLTALATGLTVAT
TAFVGAQAVASGRLSGVAMAVVVLTPLAAFEAVLGMPLAVQHRQRVRESAGRVYEILDAP
DPVREPERPLPAPGSPFPLRVLGLTARHPGQDRDALAGLDLTLERGRRIAVVGPSGSGKT
TLAQVLLRFLDAEAGTYTLDGTDAYGMDGDDVRRLVGLCAQDAHLFDSSVRENLLLARKT
ATETELRDALARARLLEWTDDLPDGLDTLIGEHGARLSGGQRQRLALARALLADFPVLVL
DEPAEHLDLPTADALTADLLAATEGRTTLLITHRLAGLEAVDEVIVLAHGRVAQRGAYAE
LSVVEGPLREMVEREAAGDLLAGAVTSPAGSDPGPVGRRDAVGSVPDFR
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccaatcgatccgcgtctgctgcggtacgcccgtgccacccgcgtcttcctgctg
acggtcgtggggctgggcgcggtcggagcggcgctggtcattgcccaggcgatgctcatc
gccgaagtcgtggtcggcgccttccagcacggtcactcggctccggagcttcgcaccccc
ctgctcctgctggtcgtggtcgccttggggcgggcactcgtcgcatggctcaccgaactc
gccgcgcaccgggcaagcgcggcggtcaagtcggaactgcggggacggctgctggagcgg
gccgccgcactcggtcccggatggctgggcggacagcgcaccgggtcgctggtcgccctc
gccacgcggggagtggacgcgctcgacgactacttctcgcgctacctcccgcagttgggc
ctcgcgatcgtggtgcccgtggcggtgctcgcgcggatcgtcaccgaagactgggtgtcg
gcggcgatcatcgtcgtcacccttccgctcatccctgtcttcatggtcctgatcggatgg
gccacgagggcgcggatggaccgtcagtggcggctgctgtcacggctttcggggcacttc
ctggacgtggtcgccggactgcccacgctcaaggtcttcggcagggccaaggcccaggcc
gagtcgatccggcggatcaccggcgagtaccgccaggcgaccatgcggaccctgcagatc
gccttcctgtcctccttcgcgctggaactgctcgccacgatctcggtcgcgctggtcgcc
gtgaccatcgggatgcggctcgtccacggcgacatggatctgtacgtggggatcgtcatc
ctcgtcctcgcgcccgaggcctacctgccgctgcgccaggtgggggcgcagtaccacgcc
gccgccgaggggctcgccgcggccgaggagatcttcgcggtgctggagaccccgttgccg
gccggcggctcgcttcccgtgccggaaggcgagatcactttcgacgcggtgacggtccgc
tatccgggacgctccggggacgcggtccgcgatgtctccttcgtggtcgcgcagggcgag
acggtggcactcgtcggaccgagcggcgtgggcaagtcgaccctgctgaacgtcctgctc
gggttcgtggaacccaccgcgggccgggtgcgggtcgggggagccgatctcgcgggatgt
gatgtggcggagtggcgctcacgggtggcctgggtgccgcagcggccgcacctcttcgcc
ggttcgatcgtggagaacgtgcggctggcacgccccgacgccgacgacgcggcggtacgg
cgggcgctggccgacgcgggggcgctggagttcgtggacgcgctgtccgacggagcccgc
acgatgctcggcgaggacggcagtggtctctccgccgggcagcgccaacgcctggccctg
gcccgggcgttcctcgcggaccggccggtgctgcttctcgacgagccgacggcctcgctc
gacggcacgacggaggcggaggtcgtgtcggcggtgcgcaggcttgccgtcgggcggacg
gtcctgctggtcgtgcaccggcccgctctgctgggggtggcggaccgggtggtgcggctt
gagcccggggccccgaccacggcggccggtcccgcacccgccgggaccacgacgcggccc
cgtccggccgagccggagggtgtgcccgcggtcgccccggaagagtccctcgcggtatcc
aggggacgcggcgacgtcctcgcccggactcgtgccatggccggtccccgcagcggtcgc
ttcgcgctcgcgctcctgctcgccagtctcgcgctcgccagcgccgtcggcctgatggcc
acctcgggatggctcatctcgcgggcgtcccagcagccgccggtcatgtatctgatgctg
gcggtgacggccacgcgggcgttcgggatcggccgtgccgtcttccgctacgccgagcgg
ctcgtgtcgcacgacgcggtgctgcggatgctggccgacacccgcgtcgccgtctaccgg
cgcctggagcgtctcgcgccggcaggactgcgcacgacccggcggggggatctgctctcg
cggctcgtcgccgacgtggacgcgctgcaggactactggctgcggtggctgctgcccgcc
ggggcggcggtcctggtgtccaccgcctccgtcggcttcaccgcatggctgctgcccgag
gccggagccgccctcgcggccggactgctggcggccggggccggcgtgccgctcgtgacc
ggggccgtcgcgcgccgcgcgcagcggcggctggcccccgcccgcggcatcctggcgacc
cgcgtcaccgatctgctcaccggcacggccgaattgacggtcgcgggcgcgctggcagcc
cgcaccgccgaggcccggcgggccgacaccgtgctgacccgcatcgcctcccggtccgcc
accgcgaccgcgctcggcgacggactcaccgcactggccaccggcctgaccgtcgccacg
accgctttcgtgggcgcccaggcggtcgcgagcgggcggctgagcggcgtggcgatggcc
gtggtcgtcctcaccccgctggccgcgttcgaggccgttctggggatgccgctcgccgtc
cagcaccggcagcgggtgcgggagagcgcgggacgcgtgtacgagatcctggacgccccc
gaccccgtacgcgaacccgagcggccgctccctgcgcccggttcgcccttcccgctgcgg
gtgctcggactcacggcccgtcaccccggacaggaccgggacgcgctcgccggcctcgac
ctgaccctcgaacggggccgcaggatcgccgtcgtgggcccctccggctccggcaagacc
acactggcacaggtgctgctgcgcttcctggacgcggaggcggggacgtacacgctggac
ggcaccgacgcatacggcatggacggcgacgacgtacgccggctggtcgggctctgcgcc
caggacgcgcacctcttcgacagcagcgtgcgggagaacctgctgctggccaggaagacc
gccacggagaccgagctgcgcgacgcgctcgcccgagcccggctcctggagtggacggac
gatctgcccgacggactcgacacactgatcggcgagcacggagcgcggctgtccggcggt
cagcgccagcggctggcactcgcccgggcgctgctcgccgacttccccgtcctcgtcctg
gacgagcccgcggaacatctcgacctgccgacggccgacgcgctcaccgcggacctgctg
gccgcgaccgagggccgtacgacgttgctgatcacccaccgtctggccgggctggaagcg
gtggacgaggtgatcgtgctggcacacggccgggtggcgcagcggggtgcgtacgccgag
ttgtccgtggtggagggtccgctgcgggagatggtggagcgggaggctgcgggggacctg
ctcgccggagcggtgacgagtccggccgggtccgaccccggacccgtgggtaggcgcgac
gccgtgggctccgtacccgactttcggtag
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