Streptomyces sp. RPA4-2: HEP85_22645
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Entry
HEP85_22645 CDS
T10422
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz00250
Alanine, aspartate and glutamate metabolism
srpz00410
beta-Alanine metabolism
srpz00430
Taurine and hypotaurine metabolism
srpz00650
Butanoate metabolism
srpz01100
Metabolic pathways
srpz01110
Biosynthesis of secondary metabolites
srpz01120
Microbial metabolism in diverse environments
srpz02024
Quorum sensing
Module
srpz_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HEP85_22645
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HEP85_22645
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HEP85_22645
00430 Taurine and hypotaurine metabolism
HEP85_22645
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HEP85_22645
Enzymes [BR:
srpz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
HEP85_22645
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
QIY63898
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Position
complement(5129575..5130981)
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AA seq
468 aa
AA seq
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MPLHKGPEKPDERPMSVNPFFGDANPLGDMTEAPPKHRLPDRPLTPTIAYQLVHDELMLD
GNARLNLATFVTTWMEPQAGVLMAECLDKNMIDKDEYPRTAELERRCVAMLADLWNAPDP
GAVVGCSTTGSSEACMLAGMALKRRWTQRNADRYPGARPNLVMGVNVQVCWEKFCNFWEV
EARQVPMEGDRFHLDPQAAAELCDENTIGVVGILGSTFDGSYEPIADLCAALDRLQERTG
LDIPVHVDGASGGMIAPFLDPDLVWDFRLPRVSSINTSGHKYGLVYPGVGWALWRSSAEL
PEELVFRVNYLGGDMPTFALNFSRPGAQVAAQYYTFLRLGREGYRAVQQTTRDLARGLAE
RIEALEDFRLITRGDQLPVFAFTTAPHVSAYDVFDVSRRMRENGWLVPAYTFPANREDLS
VLRVVCRNGFSADLADLFLEDLGRLVPQLRRQPHPWTRDKQAATGFHH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgccgctccacaaaggccccgagaagcccgacgagcgaccgatgtccgtcaaccccttc
ttcggcgacgcgaatccgctcggcgacatgaccgaggccccgcccaagcaccggctcccg
gaccggccgctgacacccacgatcgcgtaccaactggtccacgacgaactgatgctggac
ggcaacgcccggctgaatctcgccaccttcgtcaccacctggatggagccgcaggccggg
gtgctgatggcggagtgcctcgacaagaacatgatcgacaaggacgagtacccgcgcacc
gccgagctggagcgacgctgcgtggccatgctcgcggacctgtggaacgcgcccgatccc
ggggccgtcgtgggctgttccacgaccggttcgagcgaggcctgcatgctcgcggggatg
gcgctgaagcggcgctggacacagcggaacgcggaccgctacccgggagcgcgccccaac
ctcgtcatgggcgtgaacgtccaggtctgctgggagaagttctgcaacttctgggaggtc
gaggcccgccaagtccccatggagggcgaccggttccacctcgacccgcaggcggcggcc
gaactgtgcgacgagaacaccatcggggtcgtcgggatcctcggctccaccttcgacggg
tcctacgagccgatcgcggacctctgcgcggccctcgaccggctccaggagcgtacgggc
ctggacatccccgtccatgtcgacggcgcgtccggcgggatgatcgcccccttcctggac
ccggacctggtctgggacttccggctgccgcgggtgtcgtcgatcaacacctcggggcac
aagtacgggctcgtctacccgggcgtcggatgggcgctgtggcggtcgtcggccgagctg
ccggaggagctcgtcttccgggtcaactacctgggcggcgacatgccgaccttcgcgctc
aacttctcccggccgggagcacaggtcgcggcgcagtactacaccttcctgcggctgggc
cgggagggctaccgggccgtccagcagacgacccgggacctggcccgcgggctcgccgaa
cggatcgaggcgctggaggacttccgcctgatcacccggggcgaccagctgcccgtcttc
gccttcacgacggcgccccatgtgagcgcgtacgacgtcttcgacgtgtcccggcggatg
cgggagaacggctggctggtgcccgcgtacaccttcccggccaaccgggaggacctgtcc
gtgctgcgtgtggtgtgccgtaacggcttctcggcggacctcgccgacctcttcctggag
gacctgggccggctggtgccccagctgcgccgccagccgcatccgtggacccgtgacaag
caggcggcgaccggtttccaccactga
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