Streptomyces sp. RPA4-2: HEP85_25845
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Entry
HEP85_25845 CDS
T10422
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HEP85_25845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srpz03400
]
HEP85_25845
Enzymes [BR:
srpz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HEP85_25845
DNA repair and recombination proteins [BR:
srpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HEP85_25845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Spectrin_SYNE1
PipA
T2SSF
Motif
Other DBs
NCBI-ProteinID:
QIY64413
UniProt:
A0A6H1KJY7
LinkDB
All DBs
Position
complement(5825874..5826107)
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AA seq
77 aa
AA seq
DB search
MTGKVDEALGYEQARDELIEVVRRLEAGGTTLEESLALWERGEELAKVCRRWLEGARARL
DAALAEEESQDGDAGAE
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaaggtggacgaggcgctcgggtacgagcaggcgcgggacgagctgatcgag
gtcgtgcgccgcctggaggcgggcggtacgaccctggaggagtccctcgccctctgggag
cgcggcgaggaactggcgaaggtgtgccgccgctggctcgagggcgcgcgggcgcggttg
gacgcggccctggcggaggaggagtcgcaggacggggacgcgggcgccgagtga
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