Streptomyces sp. RPA4-2: HEP85_26425
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Entry
HEP85_26425 CDS
T10422
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz03420
Nucleotide excision repair
srpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HEP85_26425
03430 Mismatch repair
HEP85_26425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srpz03400
]
HEP85_26425
Enzymes [BR:
srpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEP85_26425
DNA repair and recombination proteins [BR:
srpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEP85_26425
MMR (mismatch excision repair)
Other MMR factors
HEP85_26425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
AAA_12
DUF6011
Zn_ribbon_TiaS
Zn_Ribbon_TF
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QIY64513
UniProt:
A0A6H1KK85
LinkDB
All DBs
Position
5960392..5962587
Genome browser
AA seq
731 aa
AA seq
DB search
MTAATHSTLFPQVPDTADAVLDGLDPEQRAVATALHGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPSSVLAVTFTNRAAGEMRGRLRQLGAGGVQARTFHSAALRQLQYFWPKAVGGS
LPRLIDRKIQLVADAAAACRVRLDRGELRDVTAEIEWSKVTQTVPSDYAAAAAKTGRESP
RDPAEIAQLYATYEDVKRDRSLIDFEDVLLLTVGILQDRRDIADQVRSQYQHFVVDEYQD
VSPLQQRLLELWLGERDSLCVVGDASQTIYSFTGATPDHLLDFRTRHPAATVVKLVRDYR
SSPQVVHLANGLLSQARGRAADHRLELISQRAPGPEPVYAEYTDEPAEAEGAARRIRDLI
ASGIPAGEIAVLFRTNSQSEIYEQALADAGVPYQLRGAERFFDRPEVRKAGAALRAAARF
GANDSLLDDVVDLPSQVRAVLSGEGWTGQPPAGSGAVRERWESLAALVHLAQDFAAAKQD
ATLGDLVAELDERAGAQHAPTVQGVTLASLHSAKGLEWDVVFLVGVAEGMMPITYAKTDE
QIEEERRLLYVGVTRAREHLCVSWALSRSPGGRAGRRPSRFLDGLRPGSVTTAGRTSGGG
PGGVERGIGSSGGTVVRRTSRTPARCRVCGRTLTDAGEMKLMRCEDCPSDMDEGLYERLR
EWRTVQAQRSGQPAFCVFTDKTLMAIAETVPGDEGELARIPGVGVRKLNRFGADVLAICA
GQEPGEGKRDD
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactccaccctcttcccgcaggttccggacacggccgacgcggtg
ctcgacgggctcgaccccgagcagcgcgcagtcgccaccgccctgcacggtccggtgtgc
gtgctggcaggcgccggcacgggcaagacgcgagcgatcacccaccgcatcgcctacggc
gtacgcgccggaatcctccagccctccagcgtcctcgccgtcactttcaccaaccgcgcc
gcgggagagatgcgcggccgcctccgccagctcggcgccggcggcgtccaggcccgcacc
ttccactccgcggccctgcgccaactccagtacttctggccgaaagcggtcggcggcagc
ctcccccgactcatcgaccgcaagatccagctcgtcgccgacgcggccgccgcctgccgc
gtccgcctcgaccgcggcgagctccgcgacgtcaccgccgagatcgaatggtccaaggtc
acccagaccgtcccctccgactacgcggccgccgccgccaagaccggccgcgaatccccc
cgcgaccccgcggagatcgcccagctgtacgccacctacgaagacgtcaaacgcgaccga
tcactcatcgacttcgaggacgtcctgctgctcaccgtcggcatcctccaggaccgccga
gacatcgccgaccaggtccgctcccagtaccagcacttcgtcgtcgacgagtaccaggac
gtcagccccctccagcaacgcctcctcgaactgtggctcggcgaacgcgacagcctctgc
gtcgtcggcgacgccagccagacgatctactcgttcaccggtgcaactcccgaccacctt
ctcgacttccgcacccgccaccccgcggccaccgtcgtcaaactcgtccgcgactaccgc
tcctcaccccaggtcgtccacctcgccaacggcctgctctcacaggcccgcggccgcgcc
gccgaccaccgcctggaactgatctcccagcgcgcccccggccccgaacccgtctacgcc
gaatacaccgacgaacccgccgaggcggaaggcgccgcccgccgcatccgcgacctcatc
gcctccggcatccccgcaggcgagatcgccgtcctcttccgtacgaactcccagtccgag
atctacgagcaggcactcgccgacgccggagtgccctaccagctgcgcggcgccgagcgg
ttcttcgaccgccccgaagtgcgcaaagccggagcagccctccgcgcggccgcccgattc
ggagccaacgactcccttctcgacgacgtcgtcgacctgccctcccaggtccgcgccgtg
ctgtccggcgaaggctggaccggccagccccccgccggctccggcgcggtcagggagcgc
tgggaatcactggccgccctcgtccacctcgcccaggacttcgccgccgccaagcaggac
gccaccctcggcgacctggtcgccgaactcgacgagcgcgccggcgcacagcacgccccg
accgtgcagggcgtcaccctcgcctccctgcactccgccaaaggactggagtgggacgtc
gtcttcctcgtcggcgtcgccgagggcatgatgccgatcacctacgcaaagaccgacgag
cagatcgaagaggaacgccgcctcctctacgtcggcgtcacccgcgccagagaacacctc
tgtgtctcctgggccctgtcccgctcacccggcggcagagcgggccgccggcccagccgc
ttcctcgacggactacgccccggctccgtcaccaccgcgggccgcacgagcggcggcggc
cctggaggcgtcgagcgaggcatcggaagcagcggaggcaccgtcgtacgacggacgagc
cgaaccccggcccgctgccgcgtctgcggccgcacgctgaccgacgccggcgagatgaaa
ctgatgcgctgcgaggactgcccctccgacatggacgagggcctctacgaacggctgcgc
gagtggcggacggtacaggcgcagcgcagcggccagcccgcgttctgcgtcttcaccgac
aagacactcatggccatcgccgagaccgttcccggcgacgagggagagctcgcgcggatc
cccggagtcggagtacgcaagctcaaccgcttcggagccgacgtactggccatctgcgca
ggccaggagcctggcgagggcaagcgcgacgactga
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