Streptomyces sp. RPA4-2: HEP85_28360
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Entry
HEP85_28360 CDS
T10422
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
srpz Streptomyces sp. RPA4-2
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srpz03032
]
HEP85_28360
03036 Chromosome and associated proteins [BR:
srpz03036
]
HEP85_28360
03400 DNA repair and recombination proteins [BR:
srpz03400
]
HEP85_28360
DNA replication proteins [BR:
srpz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HEP85_28360
Chromosome and associated proteins [BR:
srpz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HEP85_28360
DNA repair and recombination proteins [BR:
srpz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HEP85_28360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
QIY64813
UniProt:
A0A6H1KL26
LinkDB
All DBs
Position
6397649..6398302
Genome browser
AA seq
217 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVGGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGASATVKKA
AAKKATTAKKATARKTTAAVKKTAAKKTTTAAAKKTTTAKKATAKKTTATAKKVAAKKTT
AKKATAKKAPAKKATAKKAPAKKSTARKTTAKKTTAR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcgggcgtcagcaggcc
gccgacgcggtcgacgccgtactggacgccatcgtccgtgcagttgtcggcggggaccgg
gtctcggtcaccggcttcggttccttcgagaaggtcgaccgtccggctcgttacgcccgc
aacccgcagacgggtgagcgtgttcgggtcaagaagacctctgtgccgcgcttccgcgcc
ggtcagggcttcaaggacctggtgagcggctcgaagaagctcccgaagaacgacgtggcg
gtcaagaaggccccgaagggcagcctctccggcggcgcctcggccaccgtcaagaaggcc
gcggccaagaaggccaccaccgccaagaaggcgacggccaggaagaccaccgccgccgtg
aagaagacggccgcgaagaagaccaccaccgccgccgcgaagaagacgacgacggccaag
aaggcgaccgccaagaagaccacggcgacggccaagaaggtcgcggcgaagaagacgacg
gcgaagaaggccaccgccaagaaggccccggcgaagaaggcgaccgccaagaaggccccc
gccaagaagtcgacggctcgcaagaccaccgccaagaagaccaccgcccgctga
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