KEGG   Streptomyces sp. RPA4-2: HEP85_29005
Entry
HEP85_29005       CDS       T10422                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
srpz  Streptomyces sp. RPA4-2
Brite
KEGG Orthology (KO) [BR:srpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:srpz03016]
    HEP85_29005 (truB)
Enzymes [BR:srpz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     HEP85_29005 (truB)
Transfer RNA biogenesis [BR:srpz03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HEP85_29005 (truB)
 Prokaryotic type
    HEP85_29005 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: QIY64914
UniProt: A0A6H1KQR9
LinkDB
Position
6541944..6542849
AA seq 301 aa
MTQKLRTPDGLVIVDKPSGFTSHDVVAKMRGIAKTRRVGHAGTLDPMATGVLVLGVEKAT
KLLGHLALTEKEYLGTIRLGQNTLTDDAEGDLTSSTDASRVTREAVDAGIAKLSGAIMQV
PSKVSAIKIDGVRSYKRAREGEDFEIPARPVTISSFTVYDVRDAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKLDCARTLDQLQEELTVMPIAEAAT
AAFPRWDVDDRRARLLLNGVRLEIPEEYAGAGAVAVFDPAGQFLALVEEQKGKAKSLAVF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacccagaagctccggacgcccgacgggcttgtcatcgtggacaagccgtcgggcttc
acctcgcacgacgtggtcgccaagatgcggggcatcgcgaagacccgccgcgtcggccac
gccggcaccctcgaccccatggcgacgggcgtgctcgtcctcggcgtcgagaaggcgacc
aagctcctcgggcacctcgcgctcaccgagaaggagtacctcggtacgatccggctcggc
cagaacacgctgacggacgacgccgagggcgacctcacctcctccaccgacgcctcccgg
gtgacccgggaagccgtcgacgccgggatcgccaagctcagcggcgccatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcgacggcgtgcgctcctacaagcgggcacgtgag
ggcgaggacttcgagatcccggcccgtcccgtgacgatctcgtcgttcaccgtgtacgac
gtccgggacgccgtggccgaggacggcacgcccgtcctggacctggtcgtctccgtggtc
tgctcgtccgggacgtacatccgggcgctcgcccgcgacctcggcgcggacctgggcgtc
ggcggccatctcaccgccctgcgccgtacccgcgtcggcccgtacaagctggactgcgcg
cgtaccctcgaccagctccaggaggagctgaccgtgatgccgatcgcggaggccgccacg
gccgcgttcccgcgctgggacgtggacgacagacgggcgcgactgctgctcaacggcgtg
cgcctggagatccccgaggagtacgccggagcgggcgccgtggccgtcttcgatccggcg
gggcagttccttgcgctggtggaggagcagaaggggaaggccaagagcctcgccgtgttc
ggctga

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