Streptomyces sp. RPA4-2: HEP85_30465
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Entry
HEP85_30465 CDS
T10422
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz03030
DNA replication
srpz03430
Mismatch repair
srpz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEP85_30465
03430 Mismatch repair
HEP85_30465
03440 Homologous recombination
HEP85_30465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srpz03032
]
HEP85_30465
03400 DNA repair and recombination proteins [BR:
srpz03400
]
HEP85_30465
Enzymes [BR:
srpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEP85_30465
DNA replication proteins [BR:
srpz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEP85_30465
DNA repair and recombination proteins [BR:
srpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEP85_30465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
XDO61224
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All DBs
Position
6907916..6908638
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AA seq
240 aa
AA seq
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MGWHQELLIGFDLETTGTDPREARIVTGAVIEVKGGEPLGRREWLADPGVRIPADAVAVH
GISNERATAEGRPADQVADAIAEVLVGYWKTGVPVVAYNAAFDLTLLSAELRRHGLPSLR
ERLGGSDPAPVIDPYTIDRSVDRYRRGKRNLEAVCTEYGVELRAAHDASADALAAARLAG
AIAGRHPKVAALGPAELHRRQIEWYAEWAADFQNFLRRKGDADAVVDGTWPLRDLAGERV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcaccaggagctgctgatcggcttcgacctggagacgaccgggaccgatccg
cgcgaggcgcgcatcgtcacgggcgccgtgatcgaggtcaagggcggagaaccgctgggg
cgccgggagtggctggccgatccgggcgtacgcatcccggcggacgcggtggcggtgcac
gggatctcgaacgagcgcgcgaccgcggagggccgccccgccgaccaggtcgccgacgcg
atcgccgaggtcctcgtcgggtactggaagacgggcgtcccggtggtcgcgtacaacgcc
gccttcgacctgaccctgctctccgccgagctgcgcaggcacgggctgccctcgctgcgc
gagcggctcggcggcagcgaccccgccccggtcatcgacccgtacacgatcgaccgctcc
gtcgaccgctaccgccgcggcaagcgcaacctcgaagcggtctgcacggagtacggggtg
gagctgcgcgcggcccacgacgcctcggccgacgccctcgccgcggcccggctcgccggg
gcgatagccggccggcacccgaaggtcgcggcactcggcccggccgagctgcaccgccgc
cagatcgagtggtacgccgagtgggcggcggacttccagaacttcctgcgccgcaagggc
gacgcggacgcggtggtcgacggcacctggcccctgcgggacctggccggcgagcgggtc
tga
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