Streptomyces sp. RPA4-2: HEP85_31385
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Entry
HEP85_31385 CDS
T10422
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEP85_31385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srpz03400
]
HEP85_31385
Enzymes [BR:
srpz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HEP85_31385
DNA repair and recombination proteins [BR:
srpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HEP85_31385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QIY65284
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All DBs
Position
7133650..7134429
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AA seq
259 aa
AA seq
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MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAAEQFPVDELRELGYEAAVHATG
RWNGVAVLSRVGLEDVVRGLPGGPGYEGVEEPRAVSATCGPVRVWSVYVPNGREVGHPHY
AYKLEWFEALKAAVAGDAAGSRPFAVLGDYNVAPTDDDVWDISLFDGATHVTPAERAALT
SLRETGLSDVVPRPLKYDHPFTYWDYRQLGFPKNRGMRIDLVYGNEAFSKAVGDAYVDRE
ERKGKGASDHAPVVVDLDM
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcgacctggaacgtgaactcgatcaccgcccgcctcccgaggctgctggcc
tggctggagagcagcggcacggacgtgctctgcctccaggaggccaaggtcgctgccgag
cagttccccgtcgacgagctgcgcgagctggggtacgaggcggccgtgcacgcgaccggc
cggtggaacggagtggcggtgctctcgcgcgtaggcctggaggacgtcgtcaggggactg
cccggcggccccggctacgagggcgtcgaggaaccccgggccgtctccgcgacgtgcggc
ccggtccgcgtctggtcggtgtacgtgcccaacggccgcgaggtcggccacccccactac
gcgtacaagctcgagtggttcgaggcactcaaggcggcggtcgcgggcgacgcggcgggc
agcaggccgttcgccgtcctcggggactacaacgtggcgccgacggacgacgacgtctgg
gacatctccctgttcgacggtgccacgcacgtcacccccgccgagcgcgccgccctgacc
tcgctgcgcgagacgggcctgtcggacgtggtcccgcgccccctcaagtacgaccacccg
ttcacctactgggactaccgccagctcggcttccccaagaaccggggcatgcgcatcgac
ctggtgtacggcaacgaggcgttctccaaggcggtcggtgacgcgtatgtcgaccgtgag
gagcgcaagggcaagggggcctcggaccacgcgccggtcgtggtggacctcgacatgtga
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