KEGG   Streptomyces sp. RPA4-2: HEP85_34070
Entry
HEP85_34070       CDS       T10422                                 
Name
(GenBank) Fpg/Nei family DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
srpz  Streptomyces sp. RPA4-2
Pathway
srpz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:srpz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HEP85_34070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srpz03400]
    HEP85_34070
Enzymes [BR:srpz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     HEP85_34070
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HEP85_34070
DNA repair and recombination proteins [BR:srpz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HEP85_34070
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS Zn_ribbon_TFIIB NFACT_N Zn_ribbon_8 Zn_ribbon_RRN7
Other DBs
NCBI-ProteinID: QIY65684
UniProt: A0A6H1KSX6
LinkDB
Position
7743752..7744612
AA seq 286 aa
MPELPEVEALKDFLADHLVGREVVRVLPVAISVLKTYDPPVTAFEGREVTAVRRLGKFLD
IEADGLHFVTHLARAGWLQWRDPLPDGPPRPGKGPLALRVALANGEGFDLTEAGTQKRLA
VHVVRDPQEISGVARLGPDPLAADFDEARFAGLLEGERRRLKGALRDQSLIAGVGNAYSD
EILHAARMSPFKLASSLTPEETGRLYEALRGTLTEAVERSHGLAAGRLKREKKSGLRVHG
RAGEPCPVCGDTIREVSFSDSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq 861 nt   +upstreamnt  +downstreamnt
atgccggaactgccagaggtcgaagcgctcaaggacttcctggccgaccatctcgtcggc
cgcgaggtcgtgcgcgtgctgcccgtcgcgatcagtgtcctgaagacctacgacccgccc
gtcaccgccttcgagggccgcgaggtcaccgcggtgcgccggctgggcaagttcctcgac
atcgaggccgacggcctgcacttcgtgacgcacctggcccgcgcgggctggctgcagtgg
cgggacccgttgcccgacggcccgcccagaccgggcaagggcccactggcgctgcgcgtc
gccctggcgaacggcgagggcttcgacctcaccgaggcgggcacccagaagagactcgcc
gtgcatgtggtccgggacccgcaggagatctccggcgtggcgcgcctcggccccgacccg
ctcgccgccgacttcgacgaggcacggttcgcggggctgctcgagggggagcggcgccgg
ctcaagggcgccctgcgggaccagagcctgatcgccggcgtggggaacgcgtacagcgac
gagatcctgcacgccgccaggatgtccccgttcaagctcgcctcctcactgacgcccgag
gagacaggccggctgtacgaggcgctgcgcgggacgctcaccgaggcggtggagcgctcc
cacgggctggccgcgggtcgtctcaagagggagaagaagagcgggctgcgggtgcacggc
agggcgggcgagccctgtccggtgtgcggcgacaccatccgtgaggtctccttcagcgat
tcctcgctgcagtactgcccgacctgtcagacgggaggcaagcctctggccgaccggcgg
atgtcccggctgctcaaatag

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