Streptomyces sp. RPA4-2: HEP85_34190
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Entry
HEP85_34190 CDS
T10422
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K03701
excinuclease ABC subunit A
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
srpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEP85_34190
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HEP85_34190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
AAA_16
SMC_N
DnaJ_CXXCXGXG
DUF4350
nSTAND1
AAA_22
AAA_33
RsgA_GTPase
APS_kinase
AAA_18
HUTI_composite_bact
AAA_15
MeaB
Viral_helicase1
NTPase_1
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
QIY65704
UniProt:
A0A6H1KSZ3
LinkDB
All DBs
Position
complement(7774303..7776693)
Genome browser
AA seq
796 aa
AA seq
DB search
MSDPHGPHDPYVRVRNAREHNLRGVDVDIPRDVLAVFTGVSGSGKSSLAFGTIYAEAQRR
YFESVAPYARRLIHQVGAPKVGDITGLPPAVSLQQRRSAPTSRSSVGTVTHLSNSLRMLF
SRAGDYPAGAERLDSDAFSPNTAAGACPECHGLGRVHGTSEESLVPDPTLSIREGAIAAW
PGAWQGKNLRDVLDALGHDVDRPWRELPAGEREWILFTDEQPVVTVHPVRDAERIQRPYQ
GTYMSARRYVMKTFSDSKSATLRARAERFLSSAPCPVCGGGRLRPEALAVTFAGRTIAEL
AALPLTELAGTLRPEGETARVLTDDLRSRIAPVAELGLGYLSLDRATPTLSAGELQRLRL
ATQLRSGLFGVVYVLDEPSAGLHPADTEALLTVLERLKSAGNSVFVVEHHLDVVRAADWL
VDVGPRAGEHGGRVLHSGPVAELAGVEESATARFLFGHSPAPEREVRTPHGQLKVGPVHR
HNLRGVTAEIPLGVFTAVTGVSGSGKSTLIGEVTEELEGVGRLVSVDQRPIGRTPRSNLA
TYTGLFDVVRKVFAGTEAARERNYGVGRFSFNVTGGRCETCQGEGFVSVELLFLPSTYAP
CPDCGGARYNPETLEVTHRGRNIAQVLDMTVETATEFFDGTPAVVRSLTTLLDVGLGYLR
LGQPATELSGGEAQRIKLAGELQRVRRGHTLYVLDEPTAGLHPADVEVLMRQLHELVDAG
HTVVVVEHTMAVVAGADWVIDLGPGGGEAGGRIVAVGPPAEVARAAGSTTAPYLARALAA
PSGRGGHHLGRPGQSQ
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatccgcacggcccccacgatccgtacgtccgtgtgcgcaacgcccgtgagcac
aacctgcgcggtgtggacgtcgacattccgcgggacgtcctcgccgtcttcaccggcgtc
tcgggttccggcaagtcctcgctggcgttcgggacgatctacgcggaggcccagcggcgc
tacttcgagtcggtcgcgccgtacgcgcggcggctgatccaccaggtcggggcgccgaag
gtcggggacatcaccgggctgccccccgcggtctcgctccagcagcgccgttcggcgccc
acctcgcgctcgtccgtcggcacggtcacccacctctccaactccctgcggatgctgttc
tcccgcgccggggactatccggccggcgccgaacgcctcgactcggacgccttctcgccg
aacacggcggccggagcctgcccggagtgccacgggctcggccgggtccacggcacgagc
gaggagtcgctggtaccggatcccacgctgtcgatccgcgagggcgcgatcgccgcgtgg
cccggcgcctggcagggcaagaacctgcgcgacgtactcgacgcactgggtcacgacgtg
gaccgtccgtggcgcgagctgcccgccggcgagcgggaatggatcctgttcacggacgag
cagccggtcgtcaccgtgcatccggtgcgggatgccgagcgcatccaacgcccctatcag
ggcacgtacatgagtgcccggcgctatgtcatgaagaccttctccgactcgaagagcgcg
acgctgcgggccagggccgagcggttcctcagcagcgccccgtgcccggtgtgcggtggc
ggccggctgcgccccgaggcgctcgcggtgaccttcgccgggcggacgatcgccgagctg
gccgcgctgccgctgaccgagctggcgggaacgctgcgcccggagggggagacggcccgg
gtgctcaccgacgacctcaggtcgcgcatcgcccccgtcgccgaactcggtctcggatat
ctcagcctcgaccgcgccacccccaccctctccgcgggagaactgcaacggctgcggctg
gccacgcagttgcggtccggcctgttcggtgtcgtctacgtcctcgacgagccgtccgcc
ggtctgcacccggccgacacggaggccctgctcacggtcctggagcggctgaagtcggcg
ggcaactcggtgttcgtggtggagcaccacctcgacgtcgtgcgcgccgcggactggctc
gtcgacgtcggtccgcgggccggtgagcacggcggccgggtgctgcacagcggtccggtg
gcggagctcgccggggtcgaggagtcggccacggcccgcttcctgttcggccactcgccc
gcgccggagcgtgaagtccgcaccccgcacggccagttgaaggtggggccggtgcaccgg
cacaacctgcggggggtgaccgccgagatcccgctcggtgtgttcaccgccgtcacgggc
gtgtccggttccggcaagtccacgctcatcggcgaggtgacggaggagctggagggggtc
ggacggctcgtctcggtcgaccagcggcccatcgggcgcaccccgcgctccaatctggcc
acgtacacgggcctcttcgacgtcgtacgcaaggtgttcgccgggaccgaggcggcgcgc
gagcggaactacggggtcgggcgcttctccttcaacgtcaccggcggtcgttgtgagacc
tgccagggcgaggggttcgtgagtgtcgaactgctcttcctgccgagcacgtacgcgccg
tgcccggactgcggcggggcgcgctacaaccccgagacgctcgaagtgacccaccgcgga
cggaacatcgcgcaggtgctggacatgacggtggagaccgcgacggagttcttcgacggc
accccggccgtggtccgcagcctcaccacgctcctcgacgtggggctcggctatctgcgg
ctcggccagcccgccacggagctgtccggcggcgaggcccagcgcatcaaactggccggc
gagttgcagcgggtccgccgggggcacacgctctacgtcctcgacgaaccgacggccggg
ctgcatccggccgatgtcgaggtgctgatgcgccagttgcacgaactggtcgacgcgggg
cacaccgtcgtggtcgtcgagcacaccatggcggtggtcgcgggcgcggactgggtgatc
gacctggggccgggcggcggggaggccggcggccggatcgtggcggtggggccgcccgcc
gaggtcgcgagggcggcggggagcacgacggctccctatctcgcccgcgcgctcgccgcc
ccgtccgggcgcggaggacaccacctgggccgccccggtcagagtcagtag
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