Streptomyces sp. RPA4-2: HEP85_37305
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Entry
HEP85_37305 CDS
T10422
Name
(GenBank) FAD-binding protein
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
srpz Streptomyces sp. RPA4-2
Pathway
srpz00020
Citrate cycle (TCA cycle)
srpz00190
Oxidative phosphorylation
srpz00650
Butanoate metabolism
srpz00720
Other carbon fixation pathways
srpz01100
Metabolic pathways
srpz01110
Biosynthesis of secondary metabolites
srpz01120
Microbial metabolism in diverse environments
srpz01200
Carbon metabolism
Module
srpz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srpz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
srpz_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
srpz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HEP85_37305
00650 Butanoate metabolism
HEP85_37305
09102 Energy metabolism
00190 Oxidative phosphorylation
HEP85_37305
00720 Other carbon fixation pathways
HEP85_37305
Enzymes [BR:
srpz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HEP85_37305
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
FAD_binding_3
Pyr_redox_2
Pyr_redox_3
Thi4
GIDA
DAO
ThiF
Motif
Other DBs
NCBI-ProteinID:
QIY66185
LinkDB
All DBs
Position
complement(8494466..8496250)
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AA seq
594 aa
AA seq
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MSSLGHQLATSVLVVGAGGSGLQAAIEVAEAGVAVIAMAKGAADDVHTVDVHTVMASGGS
ERAPAAADMGDMWERHAADTLWEGRLLADPRTAQIVARCAAQGFHDAGRYGTRLDRQGHG
GPAERGFDDQTYRRSVFADERTGPEVRRALRERVRQLAIPVLPSVYVTRLLVDDGTVFGA
YGFDLVDGSRYLVHADSVILAAGGHTRIWKRASSRRDENTGDAFRLAVEAGARLRDPELV
QFHPFGLIRPESAAGMLVSEAARDEGGVLLNNLGERFMTRYDAERMELCSRDTVASASYT
EIKEGRGTRPGGVWLDLSHLPRETVLSRLPRVHQTLWDLQMLDITRDPIEVAPTAQYAMG
GVWVRPEDHGTDVNGLFVIGEAASGLHGASRLEENSLIELLVYGRIAGRAAAEYSAGLSA
LRRSPATVRAAEADVDRLLAADGDQNVRALLRSVRHLMTERAGVVRDETGLAAGLVELDE
IEARMGDMGVHIDIGGFQDLAYAYNLRSAVLAARATLECALERRETRGCHNRSDYPDADP
DLTVNLVWSPTTGVRREPVPPIPTAIAELMHGVSADVRSLEREPARRAPLSERD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgctcggacatcagctcgccacgtccgttctcgtggtcggagccggtgggtca
ggcctccaggccgccatcgaagtcgcggaggccggtgtcgcggtcatcgcgatggccaaa
ggcgccgccgacgatgtccacactgtggatgtccacactgtgatggcatccggaggttcc
gagcgggcgccggccgccgccgacatgggtgacatgtgggaacggcatgcggccgacacg
ttgtgggagggccgactgctggccgacccacgcaccgcacagatcgtggcccgctgtgcc
gcgcagggtttccacgacgcggggcgctacggcacgcgcctcgaccggcagggtcacggg
gggccggccgagcgcgggttcgacgaccagacgtaccgtcgcagcgttttcgctgacgaa
cgcaccggcccggaggtgcggcgagcgctccgcgaacgcgtgaggcaactcgccattccc
gtcctgccgagcgtgtacgtcacccggttgctggtcgacgacgggacggtgttcggtgcc
tatggattcgacctcgtcgacggctcgcgctacctcgtgcacgccgactccgtgatcctc
gcggccggagggcacacgcgcatctggaaacgtgcctcctcgcgtcgcgacgagaacacc
ggcgacgccttccgcctcgccgtcgaggcgggcgcccggttgcgcgaccccgagctggtg
cagttccaccccttcgggctgatcaggccggagagcgcggccggcatgctcgtcagcgag
gcggcacgcgacgagggtggcgtcctgctcaacaacctcggtgagcggttcatgacgcgc
tacgacgccgagcggatggaactctgcagccgggacacggtggcgtcggcgtcctacacg
gagatcaaggagggccgcggcacacggccaggcggtgtgtggctcgacctgtcccacctg
ccgcgtgagacggtactgtcgcggctgccgcgggtgcaccagaccctgtgggacctgcag
atgctcgacatcacccgcgacccgatcgaggtggcgccgaccgcccaatacgccatgggc
ggtgtctgggtccggcctgaggaccacggcaccgatgtcaacggactcttcgtgatcggg
gaggcggccagtggtctgcacggcgcgagccggttggaggagaactcgctgatcgaactg
ctcgtctacggccgaatcgccggccgggccgccgcggagtactcggccggactcagcgcc
ctgcgacggtcgccggcgacggttcgtgccgcggaggcggacgtggaccggctcctggcc
gccgacggcgaccagaacgtccgggccctgctgcggtcggtgcgccacctgatgacggag
cgcgccggtgtcgtgcgggacgagacgggtctggccgccgggctcgtcgaactcgacgag
atcgaggcccgcatgggggacatgggtgtgcacatcgacatcggcggcttccaggacctc
gcgtacgcctataacctcaggtccgccgttctcgccgctcgcgcgacactcgagtgcgcg
ctggagcggcgtgagacgcgcggctgccacaaccggtccgactaccccgatgccgacccg
gacctgacagtcaaccttgtgtggtcccccacgaccggggtgcggcgcgagcccgtccct
cccatccccaccgccatcgccgagttgatgcacggcgtctcggccgacgtcaggtcgctg
gagcgggagcccgcccggcgggcgccgctgtcggagcgcgactga
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